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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
18
fibroblast
18
pericyte cell
16
endothelial cell
12
excitatory neuron
12
smooth muscle cell
10
macrophage
9
astrocyte
9
pigmented layer of retina
8
glutamatergic neuron
7
retina
7
retinal pigment epithelial cell
6
colon epithelial cell
5
chondrocyte
5
cortical cell of adrenal gland
5
erythroblast
5
gabaergic neuron
5
inhibitory neuron
5
type II pneumocyte
4
T cell
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
keratinocyte
4
luminal epithelial cell of mammary gland
4
pancreatic acinar cell
4
skeletal muscle satellite cell
4
smooth muscle cell of the esophagus
3
B cell
3
SGBS preadipocytes
3
endocardial cell
3
endothelial cell of lymphatic vessel
3
enteric neuron
3
enterocyte
3
fibroblast of cardiac tissue
3
mesothelial cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic ductal cell
3
schwann cell
3
skeletal muscle fiber
3
type I pneumocyte
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
Muller cell
2
adipocyte
2
alveolar macrophage
2
basal cell
2
basal cell of epidermis
2
cardiac endothelial cell
2
ciliated cell
2
club cell
2
colon goblet cell
2
eccrine cell
2
endothelial cell of hepatic sinusoid
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
fetal cardiomyocyte
2
foveolar cell of stomach
2
granular cell of epidermis
2
hepatocyte
2
intestinal tuft cell
2
luteal cell
2
mammary gland epithelial cell
2
mast cell
2
mature NK T cell
2
melanocyte
2
memory B cell
2
mesangial cell
2
microglial cell
2
myoepithelial cell
2
naive t cell
2
neuron
2
non keratinizing barrier epithelial cell
2
pancreatic A cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
paneth cell
2
parietal cell
2
peptic cell
2
plasma cell
2
regular atrial cardiac myocyte
2
respiratory goblet cell
2
skeletal muscle fibroblast
2
skin fibroblast
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
stromal cell
2
thyroid follicular cell
2
type B pancreatic cell
2
type I cell of adrenal cortex
2
type I muscle cell
2
type II cell of adrenal cortex
2
type II muscle cell
2
uterine smooth muscle cell
2
ventricular cardiac muscle cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipose tissue
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
embryonic stem cell
1
enteroendocrine cell
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
gastric goblet cell
1
glial cell
1
goblet cell
1
hepatic stellate cell
1
hepatoblast
1
islet of Langerhans
1
lung neuroendocrine cell
1
megakaryocyte
1
metanephros
1
microglial cell/astrocyte
1
neuron cell of Hypothalamus (neuron)
1
non-neuronal cell
1
parietal epithelial cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
retinal bipolar neuron
1
sympathetic neuron
1
trophoblast giant cell
1
ureteric bud
Date released
3
November, 2022
2
January, 2020
1
June, 2020
0
November, 2021
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR147XOZ
released
Annotation file set
: Accessible chromatin of ATAC-seq in a human cell model of immature adipocyte day 4
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR878UKL
released
Annotation file set
: Accessible chromatin of ATAC-seq in a human cell model of immature adipocyte day 2
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR016QWO
released
Annotation file set
: Accessible chromatin of ATAC-seq in a human cell model of preadipocytes day 0
Lab:
AMP-T2D consortium
Project:
AMP