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Schema
Citing CMDGA
Clear Filters
Annotation type
3
differential activity
1
accessible chromatin
1
gene expression
Annotation Category
4
Gene expression levels
1
cis-regulatory elements
Annotation type Category
4
scRNA-seq
1
ATAC-seq
Available data
4
tsv
1
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
9
islet of Langerhans
7
induced pluripotent stem cell
6
pancreatic beta cell
5
pancreatic acinar cell
5
pancreatic alpha cell
5
pancreatic ductal cell
4
heart left ventricle
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic delta cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic stellate cell
3
B cell
3
CD8-positive, alpha-beta T cell
3
EndoC_BH1
3
heart
3
monocyte
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic quiescent stellate cell
3
tibial artery
3
tibial nerve
2
cardiac fibroblast
2
muscle of leg
2
CD4-positive, alpha-beta T cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
ascending aorta
2
central memory CD8-positive, alpha-beta T cell
2
coronary artery
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell of umbilical vein
2
gamma-delta T cell
2
left renal cortex interstitium
2
mature natural killer cell
2
medulla oblongata
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
midbrain
2
naive regulatory T cell
2
pancreas
2
regulatory T cell
2
right atrium auricular region
2
right kidney
2
right renal cortex interstitium
2
skeletal muscle myoblast
2
thoracic aorta
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Pancreatic islets
1
Preadipose SGBS cell line (adipocyte)
1
activated CD4-positive, alpha-beta T cell
1
adipocyte
1
adipose tissue
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain
1
brain pericyte
1
cardiac muscle cell
1
cardiac precursors
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
caudate nucleus
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
erythroblast
1
frontal cortex
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hepatic stellate cell
1
hepatocyte
1
immature natural killer cell
1
inflammatory macrophage
1
kidney
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
left cardiac atrium
1
left renal pelvis
1
lymphocyte of B lineage (iPSC)
1
macrophage
1
megakaryocyte
1
mesenchymal stem cell
1
middle frontal gyrus
1
muscle of arm
1
myeloid dendritic cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
occipital lobe
1
plasma cell
1
plasmacytoid dendritic cell
1
pons
1
putamen
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
right renal pelvis
1
skeletal muscle cell
1
skeletal muscle satellite cell
1
smooth muscle cell of the brain vasculature
1
subcutaneous adipose tissue
1
superior temporal gyrus
1
thymus
Organ
5
epithelium
5
pancreas
Date released
4
March, 2023
4
November, 2021
3
February, 2024
2
January, 2021
2
May, 2021
1
August, 2018
1
February, 2021
1
October, 2019
0
May, 2020
Software used
4
r
1
macs
Lab
4
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR792GEO
released
Annotation file set
: Differential activity within acinar in T2D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR008ZUM
released
Annotation file set
: Differential activity within acinar in T1D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR851ART
released
Annotation file set
: Differential activity within acinar in T1D Aab+
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR556ASG
released
Annotation file set
: Gene expression annotation of pancreatic acinar from single-cell transcriptome analysis
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR639GZY
released
Annotation file set
: Pancreatic acinar cell accessible chromatin annotation of overlapping ATAC-seq sites from 4 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP