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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
48
brain
9
caudate nucleus
9
layer of hippocampus
6
Brodmann (1909) area 46
6
SK-N-DZ
6
SK-N-SH
6
angular gyrus
6
cerebellum
6
cingulate gyrus
6
frontal cortex
6
substantia nigra
6
temporal lobe
3
A172
3
Ammon's horn
3
BE(2)-C
3
Daoy
3
H54
3
M059J
3
SK-N-MC
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
brain microvascular endothelial cell
3
cerebellar cortex
3
choroid plexus epithelial cell
3
globus pallidus
3
inferior parietal cortex
3
medulla oblongata
3
medulloblastoma
3
midbrain
3
middle frontal gyrus
3
pons
3
putamen
Organ
3
blood vessel
3
brain
3
epithelium
3
vasculature
Life stage
3
unknown
Date released
3
September, 2022
1
February, 2021
1
January, 2020
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR205TDH
released
Annotation file set
: Candidate regulatory elements for BSS00143 brain microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR658UET
released
Annotation file set
: Target gene predictions for BSS00143 brain microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR909RVE
released
Annotation file set
: Chromatin states for BSS00143 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP