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Citing CMDGA
Clear Filters
Annotation type
1643
candidate regulatory elements
1336
target gene predictions
977
histone modifications
930
chromatin state
861
accessible chromatin
817
binding sites
682
gene expression
169
eQTL
167
differential activity
138
variant allelic effects
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Annotation Category
1
Genetic variant effects
1
Others
Annotation type Category
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
1
adult
Date released
1
May, 2021
1
November, 2019
Software used
1
limix
1
macs
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
RFA
2
AMP
organ_slims!
adrenal gland
annotation_type!
Fine-mapped variants
Showing 2 of 2 results
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Download
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR942GKV
released
Annotation file set
: Annotation for gene TSS
Lab:
Kyle Gaulton, UCSD
Project:
AMP