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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
31
candidate regulatory elements
17
chromatin state
14
target gene predictions
12
accessible chromatin
12
gene expression
7
eQTL
3
Fine-mapped variants
2
histone modifications
2
variant allelic effects
1
binding sites
1
differential activity
Annotation Category
7
Genetic variant effects
Annotation type Category
7
RNA-seq
1
RNA microarray
Available data
2
bed bed3+
1
tsv
File set status
7
released
Genome assembly (visualization)
5
hg19
2
GRCh38
1
hg18
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
13
islet of Langerhans
7
liver
7
macrophage
6
lymphoblastoid cell line
6
subcutaneous adipose tissue
4
adipose tissue
4
monocyte
3
blood cell
3
putamen
3
skin of body
3
substantia nigra
2
T cell
2
amygdala
2
anterior cingulate cortex
2
articular chondrocyte
2
blood
2
brain
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
coronary artery
2
fibroblast
2
frontal cortex
2
hypothalamus
2
iPSC derived cell line
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
regulatory T cell
2
right atrium auricular region
2
skeletal muscle tissue
2
tibial artery
2
tibial nerve
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
ascending aorta
1
body of pancreas
1
breast
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
gastrocnemius medialis(Muscle - Skeletal)
1
heart left ventricle
1
helper T cell
1
kidney
1
layer of hippocampus
1
left ventricle myocardium
1
lung
1
mesenchymal stem cell
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
nephron tubule
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
progenitor cell
1
prostate gland
1
renal glomerulus
1
retina
1
right lobe of liver
1
sensory neuron
1
small intestine
1
smooth muscle cell
1
spinal cord
1
spleen
1
stomach
1
synovial joint
1
testis
1
thyroid gland
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
6
adipose tissue
6
connective tissue
1
kidney
Life stage
5
adult
Date released
4
August, 2021
1
February, 2020
1
February, 2021
1
January, 2022
Software used
2
matrix-eQTL
1
epacts
1
fast-lmm
1
fastqtl
1
gtex_eqtl:V8
1
mach2qtl
1
qTLtools
Lab
5
AMP-T2D consortium
1
Karen Mohlke, UNC
1
Katalin Susztak, Upenn
Project
7
AMP
RFA
6
AMP
1
AMP2
organ_slims!
adrenal gland
Showing 7 of 7 results
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Download
FileSet
DSR943WPJ
released
Annotation file set
: adipose subcutaneous eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR513VNX
released
Annotation file set
: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR397GGI
released
Annotation file set
: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669QFK
released
Annotation file set
: eQTLs from RNA microarray samples from 770 males who are part of the METSIM study of subcutaneous adipose tissue for GSE70353
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR965YTD
released
Annotation file set
: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR655IYK
released
Annotation file set
: eQTL of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP