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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
chromatin state
Annotation Category
4
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
1
bed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
6
cell line
Biosample term
57
A549
51
lung
39
left lung
34
right lung
13
fibroblast of lung
10
upper lobe of left lung
7
type II pneumocyte
6
IMR-90
5
PC-9
4
NCI-H226 cell
4
type I pneumocyte
3
NCI-H460 cell
3
WI38
3
lung microvascular endothelial cell
1
endothelial cell of artery
1
lung neuroendocrine cell
Organ
6
lung
Life stage
3
embryonic
Date released
February, 2021
3
September, 2022
1
June, 2020
1
May, 2021
1
October, 2022
Software used
2
chromhmm
2
r
1
abc
1
macs
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
organ_slims!
adrenal gland
month_released!
February, 2021
Showing 6 of 6 results
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Download
FileSet
DSR195QHJ
released
Annotation file set
: Binding sites annotation for IMR-90 (IMR90) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR446ATU
released
Annotation file set
: Candidate regulatory elements for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772ORX
released
Annotation file set
: Target gene predictions for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR822GKY
released
Annotation file set
: Chromatin states for BSS00720 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895REE
released
Annotation file set
: enhancer-gene predicton of IMR90-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR879CGQ
released
Annotation file set
: Accessible chromatin annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP