Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
216
candidate regulatory elements
129
target gene predictions
125
chromatin state
53
accessible chromatin
31
gene expression
17
variant allelic effects
12
Fine-mapped variants
12
eQTL
12
histone modifications
11
binding sites
4
caQTL
1
differential activity
Annotation Category
4
Genetic variant effects
Annotation type Category
3
snATAC-seq
1
ATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
1
coronary artery
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
Date released
2
February, 2023
2
October, 2022
Software used
4
rasqual
2
eigenmt
Lab
2
AMP-T2D consortium
2
Stephen Parker, UMich
Project
4
AMP
RFA
2
AMP
2
AMP2
organ_slims!
adrenal gland
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP