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Citing CMDGA
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Annotation type
1661
candidate regulatory elements
1318
target gene predictions
972
histone modifications
935
chromatin state
853
accessible chromatin
810
binding sites
662
gene expression
164
eQTL
131
variant allelic effects
123
differential activity
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
1
other
1
representative DNase hypersensitivity sites
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
1
adult
Date released
1
May, 2021
Software used
1
limix
1
macs
Lab
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
organ_slims!
artery
lab.title!
Kyle Gaulton, UCSD
Showing 1 of 1 results
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Download
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP