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Schema
Citing CMDGA
Clear Filters
Annotation type
17
gene expression
16
candidate regulatory elements
15
accessible chromatin
10
binding sites
10
differential activity
7
chromatin state
5
variant allelic effects
4
target gene predictions
3
Fine-mapped variants
1
caQTL
1
eQTL
1
histone modifications
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
6
bed bed9
6
bigBed bed9
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
6
GRCh38
Organism
7
Homo sapiens
Biosample type
4
tissue
3
primary cell
Biosample term
3
endothelial cell of umbilical vein
2
aorta
1
ascending aorta
1
thoracic aorta
Organ
15
heart
12
brain
9
blood vessel
9
vasculature
8
connective tissue
6
musculature of body
5
epithelium
4
intestine
4
limb
4
pancreas
3
large intestine
3
liver
3
vein
2
adipose tissue
artery
2
blood
2
bodily fluid
2
kidney
1
bone element
1
bone marrow
1
embryo
1
lung
1
mammary gland
1
nerve
1
skin of body
1
small intestine
1
stomach
Life stage
4
adult
Date released
September, 2022
4
January, 2020
2
October, 2019
1
August, 2017
Software used
7
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
organ_slims!
artery
month_released!
September, 2022
Showing 7 of 7 results
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Download
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649MVO
released
Annotation file set
: ChromHMM 18-state model for Thoracic Aorta from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR220DMW
released
Annotation file set
: ChromHMM 16-state model for ascending aorta from ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR371GSC
released
Annotation file set
: ChromHMM 18-state model for heart aorta from ENCODE ChIP-seq data. ROADMAP aorta Annotation
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR429DXE
released
Annotation file set
: ChromHMM 15-state model for heart aorta from ENCODE ChIP-seq data. ROADMAP aorta Annotation
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP