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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
37
heart
32
brain
32
muscle of arm
28
lung
28
muscle of leg
28
placenta
26
large intestine
26
left lung
26
muscle of back
26
stomach
25
kidney
24
small intestine
22
right kidney
22
right lung
20
thymus
18
left kidney
18
renal cortex interstitium
18
renal pelvis
16
adrenal gland
14
spinal cord
10
trophoblast cell
8
chorionic villus
8
muscle of trunk
8
neural progenitor cell
6
left renal cortex interstitium
6
neurosphere
6
retina
6
right renal cortex interstitium
5
liver
4
chorion membrane
4
endodermal cell
4
eye
4
heart left ventricle
4
left renal pelvis
4
limb
4
right renal pelvis
4
skin fibroblast
4
tongue
4
trophoblast
3
H1-hESC
3
cardiac precursors (cardiac muscle cell)
3
germinal matrix
3
heart right ventricle
3
kidney capillary endothelial cell
3
left cardiac atrium
2
AG04449 cell
2
AG04450 cell
2
ELF-1
2
ES-I3
2
H7-hESC
2
H9
2
HEK293
2
HEK293T
2
HTR-8/Svneo
2
HUES48
2
HUES6
2
HUES64
2
IMR-90
2
UCSF-4
2
amnion
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
arm bone
2
cardiac mesoderm primordium
2
cardiac muscle cell
2
ectodermal cell
2
embryonic facial prominence
2
femur
2
fibroblast of cardiac tissue
2
hepatocyte
2
islet precursor cell
2
leg bone
2
mesenchymal stem cell
2
mesendoderm
2
mesodermal cell
2
neural cell
2
neuron
2
ovary
2
skin of body
2
smooth muscle cell
2
spleen
2
testis
2
umbilical cord
2
urinary bladder
1
aorta
1
aortic valve
1
astrocyte
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
mitral valve
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary valve
1
right cardiac atrium
1
tricuspid valve
Organ
2
connective tissue
Life stage
3
adult
2
embryonic
1
unknown
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
blood
annotation_type!
candidate regulatory elements
Showing 2 of 2 results
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Download
FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR073XBJ
released
Annotation file set
: Chromatin states for BSS01261 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP