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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
67
muscle of arm
58
muscle of leg
54
muscle of back
20
psoas muscle
18
gastrocnemius medialis
17
muscle of trunk
16
skeletal muscle tissue
13
skeletal muscle satellite cell
11
breast epithelium
11
esophagus muscularis mucosa
9
skeletal muscle fiber
9
stomach smooth muscle
7
LHCN-M2
7
gastroesophageal sphincter
7
type I muscle cell
7
type II muscle cell
6
skeletal muscle cell
5
A673
5
SJCRH30
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
myotube
4
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
forelimb muscle
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
aortic smooth muscle cell
1
breast
1
breast - mammary tissue
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
rectal smooth muscle tissue
1
smooth muscle tissue
Organ
5
musculature of body
0
breast
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
blood
Showing 5 of 5 results
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Download
FileSet
DSR213OLP
released
Annotation file set
: Candidate regulatory elements for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR359BQQ
released
Annotation file set
: Target gene predictions for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR863JWS
released
Annotation file set
: Chromatin states for BSS01549 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR746IZY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE SJCRH30
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR907POK
released
Annotation file set
: Accessible chromatin annotation for Muscle SJCRH30 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP