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Schema
Citing CMDGA
Clear Filters
Annotation type
7
chromatin state
6
accessible chromatin
4
candidate regulatory elements
3
binding sites
2
gene expression
2
histone modifications
2
target gene predictions
1
eQTL
Annotation Category
2
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
21
stomach
20
heart
19
A549
19
CD14-positive monocyte
19
HFFc6
16
adrenal gland
16
lung
16
muscle of arm
16
small intestine
15
placenta
14
common myeloid progenitor, CD34-positive
14
kidney
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
12
thymus
11
right lung
10
hematopoietic multipotent progenitor cell
10
pericyte cell
10
right kidney
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
liver
9
renal cortex interstitium
9
renal pelvis
8
GM12878
8
H9
8
spinal cord
7
CD8-positive, alpha-beta memory T cell
7
adipose tissue
7
endothelial cell
7
lymphocyte
7
psoas muscle
7
smooth muscle cell
7
spleen
7
trophoblast cell
6
MCF-7
6
adipocyte
6
dendritic cell
6
heart left ventricle
6
mononuclear cell
6
olfactory receptor cell
6
sigmoid colon
5
body of pancreas
5
gastrocnemius medialis
5
keratinocyte
5
muscle of trunk
5
natural killer cell
5
ovary
5
thyroid gland
5
transverse colon
4
CD8-positive, alpha-beta T cell
4
CyT49
4
HUES8
4
T cell
4
astrocyte
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
heart right ventricle
4
hepatocyte
4
iPSC derived cell line
4
mammary gland epithelial cell
4
neural progenitor cell
4
pancreas
4
pancreatic delta cell
4
regulatory T cell
3
HCT116
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
aorta
3
breast epithelium
3
chorion membrane
3
coronary artery
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
foreskin fibroblast
3
immortal human breast epithelial cell line cell
3
luminal epithelial cell of mammary gland
3
macrophage
3
mesenchymal stem cell
3
naive T cell
3
neurosphere
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
retina
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
skin fibroblast
3
testis
3
tibial nerve
3
type B pancreatic cell
3
upper lobe of left lung
2
22Rv1
2
A673
2
BJAB cell
2
CD4-positive helper T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
HepG2
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
T-cell
2
T47D
2
THP-1
2
U937
2
ascending aorta
2
bipolar neuron
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cardiac muscle cell
2
cardiomyocytes (cardiac muscle cell)
2
colonic mucosa
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
gabaergic neuron
2
glutamatergic neuron
2
iPS DF 19.11
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
memory B cell
2
mesendoderm
2
monocyte
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive B cell
2
neutrophil
2
omental fat pad
2
osteoblast
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
type II pneumocyte
2
urinary bladder
2
uterus
2
vagina
1
8988T
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
Organ
2
vagina
Life stage
2
adult
Date released
2
September, 2022
Software used
2
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
brain
annotation_type_category!
pCHi-C
Showing 2 of 2 results
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Download
FileSet
DSR360IHG
released
Annotation file set
: Target gene predictions for BSS01887 vagina from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR142TCF
released
Annotation file set
: Target gene predictions for BSS01886 vagina from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP