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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
primary cell
3
cell line
Biosample term
90
heart
84
stomach
81
kidney
68
lung
67
muscle of arm
63
HeLa-S3
62
small intestine
61
A549
60
adrenal gland
59
placenta
57
muscle of leg
55
large intestine
54
muscle of back
53
H1-hESC
52
left lung
50
neural progenitor cell
48
liver
47
thymus
45
right lung
44
islet of Langerhans
43
hematopoietic multipotent progenitor cell
42
right kidney
40
K562
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
34
heart left ventricle
34
spinal cord
32
spleen
30
adipose tissue
25
MCF-7
25
tibial nerve
23
EndoC_BH1
23
body of pancreas
22
sigmoid colon
21
pancreas
21
subcutaneous adipose tissue
20
breast cancer cell
20
pigmented layer of retina
19
HFFc6
19
coronary artery
19
heart right ventricle
19
ovary
19
psoas muscle
19
right atrium auricular region
18
tibial artery
17
adipocyte
17
embryonic stem cell
17
gastrocnemius medialis
17
omental fat pad
17
testis
17
thyroid gland
17
transverse colon
16
HepG2
16
chorionic villus
16
muscle of trunk
16
skeletal muscle tissue
16
upper lobe of left lung
15
GM12878
15
H9
15
ascending aorta
15
induced pluripotent stem cell
14
endocrine pancreas
14
prostate gland
13
Peyer's patch
13
aorta
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
neuroblastoma cell
11
cardiac muscle cell
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
10
22Rv1
10
Rhabdomyosarcoma
10
breast epithelium
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
lymphocyte
10
mesenchymal stem cell
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
HEK293
9
NAMALWA cell
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
liposarcoma
9
parathyroid adenoma
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HL-60
8
IMR-90
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BJ cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
HAP-1
7
HT-29
7
KARPAS-422 cell
7
LHCN-M2
7
LNCaP clone FGC
7
MG63
7
MM.1S
7
OCI-LY7
7
T47D
7
WERI-Rb-1
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
mesendoderm
7
right lobe of liver
7
stomach smooth muscle
6
Chondroid Chordoma
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
KBM-7
6
LoVo cell
6
NT2-D1 cell
6
OCI-LY1
6
PC-3
6
PC-9
6
RPMI8226
6
RWPE1
6
Rh-4 cell
6
SJSA1
6
SW480
6
WI38
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
hESC cell
6
iPSC derived cell line
6
mesodermal cell
6
mucosa of rectum
6
neuroblastoma cell line
6
occipital lobe
6
pancreatic ductal cell
6
superior temporal gyrus
6
urinary bladder
5
ACHN
5
C1 segment of cervical spinal cord
5
Caki2
5
CyT49
5
Ewing sarcoma
5
GM04503
5
GM04504
5
H4
5
H7-hESC
5
HK-2 cell
5
HUES64
5
Jurkat
5
L1-S8
5
LNCAP
5
NB4
5
OCI-LY3
5
SGBS preadipocytes
5
muscle layer of colon
5
muscle layer of duodenum
5
neuronal stem cell
5
osteosarcoma
5
prostate cancer cell line
5
right cardiac atrium
5
skin of body
5
umbilical cord
5
uterus
Organ
3
connective tissue
3
penis
3
skin of body
Life stage
3
newborn
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
organ_slims!
brain
biosample_type!
primary cell
lab.title!
Jesse Engreitz, Stanford University
Showing 3 of 3 results
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Download
FileSet
DSR675PPG
released
Annotation file set
: Candidate regulatory elements for BSS00697 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR923ELC
released
Annotation file set
: Target gene predictions for BSS00697 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR126PKD
released
Annotation file set
: Chromatin states for BSS00697 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP