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Citing CMDGA
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Annotation type
5
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ATAC-seq
Available data
4
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
in vitro differentiated cells
Biosample term
9
pigmented layer of retina
7
retina
6
retinal pigment epithelial cell
5
chondrocyte
4
glutamatergic neuron
3
SGBS preadipocytes
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
adipose tissue
1
embryonic stem cell
1
gabaergic neuron
1
microglial cell/astrocyte
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
non-neuronal cell
1
oligodendrocyte
Life stage
4
adult
Date released
11
May, 2021
5
February, 2021
5
November, 2022
4
November, 2021
1
March, 2020
Software used
5
macs
Lab
4
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
5
AMP
RFA
4
AMP
1
AMP2
organ_slims!
bronchus
Showing 5 of 5 results
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FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR936UDZ
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from primary visual cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR223FVD
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from dorsolateral prefrontal cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR357LJU
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from anterior cingulate cortex from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR341UVB
released
Annotation file set
: Accessible chromatin of glutamatergic neurons from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP