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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
8
chromatin state
7
target gene predictions
5
accessible chromatin
3
Fine-mapped variants
3
variant allelic effects
2
binding sites
2
eQTL
1
caQTL
1
gene expression
Annotation Category
8
cis-regulatory elements
Annotation type Category
8
ChIP-seq
Available data
7
bed bed9
3
bigBed bed9
1
bed bed3+
1
bigWig
File set status
8
released
Genome assembly (visualization)
8
hg19
7
GRCh38
Organism
8
Homo sapiens
Biosample type
5
primary cell
3
tissue
Biosample term
5
endothelial cell of umbilical vein
4
aorta
3
ascending aorta
3
coronary artery
3
thoracic aorta
3
tibial artery
2
dermis blood vessel endothelial cell
1
brain microvascular endothelial cell
1
kidney capillary endothelial cell
1
pulmonary artery endothelial cell
Organ
8
blood vessel
8
vasculature
5
epithelium
5
vein
3
artery
3
heart
Life stage
3
adult
2
newborn
Date released
4
September, 2022
2
January, 2020
1
August, 2017
1
May, 2019
Software used
8
chromhmm
Lab
7
AMP-T2D consortium
1
Stephen Parker, UMich
Project
8
AMP
RFA
8
AMP
organ_slims!
connective tissue
Showing 8 of 8 results
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Download
FileSet
DSR660JUZ
released
Annotation file set
: Chromatin states for BSS00298 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR550HDB
released
Annotation file set
: Chromatin states for BSS00296 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR823JJW
released
Annotation file set
: Chromatin states for BSS00243 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR679HDX
released
Annotation file set
: Chromatin states for BSS00242 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR716IKT
released
Annotation file set
: ChromHMM 4-state model for coronary artery from ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP