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Schema
Citing CMDGA
Clear Filters
Annotation type
23
gene expression
22
candidate regulatory elements
21
accessible chromatin
20
target gene predictions
16
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
hepatocyte
1
Liver fetal (hepatocyte)
Organ
41
epithelium
17
brain
connective tissue
16
kidney
15
vasculature
11
pancreas
10
heart
9
blood vessel
8
limb
7
musculature of body
4
artery
4
liver
3
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Life stage
1
fetal
Date released
2
May, 2020
1
February, 2024
Software used
3
deltasvm
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
organ_slims!
connective tissue
Showing 3 of 3 results
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Download
FileSet
DSR179RJC
released
Annotation file set
: Variant allelic effects annotation of Hepatocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR438ODC
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver fetal ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488RFU
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver hepatocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP