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Schema
Citing CMDGA
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Annotation type
38
candidate regulatory elements
29
target gene predictions
24
chromatin state
24
gene expression
23
accessible chromatin
14
binding sites
12
histone modifications
10
eQTL
6
Fine-mapped variants
4
differential activity
3
variant allelic effects
1
caQTL
Annotation Category
4
Gene expression levels
Annotation type Category
3
scRNA-seq
1
RNA-seq
Available data
4
tsv
File set status
4
released
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
3
pancreatic endothelial cell
1
liver
Disease term
1
coronary artery disease
Organ
92
epithelium
56
kidney
33
pancreas
18
vasculature
connective tissue
12
blood vessel
4
liver
2
adipose tissue
2
artery
2
lymphatic vessel
1
musculature of body
0
spinal cord
Life stage
1
adult
Date released
3
March, 2023
1
February, 2024
Software used
3
r
1
deseq2
Lab
3
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
connective tissue
Showing 4 of 4 results
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FileSet
DSR054IUR
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR230XXF
released
Annotation file set
: Differential activity within endothelial in T2D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR481EVB
released
Annotation file set
: Differential activity within endothelial in T1D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR721CKF
released
Annotation file set
: Differential activity within endothelial in T1D Aab+
Lab:
Kyle Gaulton, UCSD
Project:
AMP