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Citing CMDGA
Clear Filters
Annotation type
1571
candidate regulatory elements
1235
target gene predictions
949
histone modifications
891
chromatin state
774
binding sites
656
accessible chromatin
430
gene expression
167
eQTL
98
variant allelic effects
75
differential activity
74
Fine-mapped variants
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Annotation Category
1
Genetic variant effects
1
Others
Annotation type Category
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
1
adult
Date released
1
May, 2021
1
November, 2019
Software used
1
limix
1
macs
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
RFA
2
AMP
organ_slims!
epithelium
annotation_type!
caQTL
Showing 2 of 2 results
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Download
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR942GKV
released
Annotation file set
: Annotation for gene TSS
Lab:
Kyle Gaulton, UCSD
Project:
AMP