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Citing CMDGA
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Annotation type
1
accessible chromatin
1
caQTL
1
eQTL
1
gene expression
Annotation Category
2
Genetic variant effects
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2
liver
2
subcutaneous adipose tissue
Organ
2
adipose tissue
2
connective tissue
2
liver
Life stage
2
adult
Date released
2
February, 2021
2
May, 2022
Software used
1
eigenmt
1
fastqtl
1
macs
1
r
1
rasqual
Lab
6212
AMP-T2D consortium
242
Bing Ren, UCSD
129
Jesse Engreitz, Stanford University
126
KPMP
66
Kyle Gaulton, UCSD
58
Stephen Parker, UMich
33
Katalin Susztak, Upenn
12
Xin Sun, UCSD
8
Struan F.A. Grant, CHOP
7
Anna Gloyn, Oxford
5
ITG
5
Patrick T. Ellinor, Broad
4
Karen Mohlke, UNC
3
Stephen S. Rich Lab @UVA
2
Doug Phanstiel, UNC
Project
4
AMP
RFA
4
AMP
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epithelium
biosample_term_name!
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Showing 4 of 4 results
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Download
FileSet
DSR303OZW
released
Annotation file set
: Accessible chromatin annotation(consensus peaks) of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR306BCP
released
Annotation file set
: Gene expression annotation of subcutaneous adipose tissue for GSE135134
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR965YTD
released
Annotation file set
: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab:
Karen Mohlke, UNC
Project:
AMP