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Schema
Citing CMDGA
Clear Filters
Annotation type
30
histone modifications
7
candidate regulatory elements
5
accessible chromatin
5
target gene predictions
3
gene expression
1
chromatin state
Annotation Category
3
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
1
scRNA-seq
Available data
3
tsv
1
bed bed9+
1
txt
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
24
heart
23
kidney
20
stomach
19
brain
18
A549
17
lung
16
muscle of arm
15
adrenal gland
15
monocyte
15
muscle of leg
15
small intestine
14
islet of Langerhans
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
neural progenitor cell
11
right lung
11
thymus
10
B cell
10
H1-hESC
10
T-helper 1 cell
10
T-helper 17 cell
10
liver
10
regulatory T cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
adipose tissue
9
extended pluripotent stem (EPS) cells
9
heart left ventricle
9
induced pluripotent stem cell
9
left kidney
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
adipocyte
7
CD8-positive, alpha-beta memory T cell
7
K562
7
left cardiac atrium
7
mature neutrophil
7
spinal cord
7
spleen
6
T-helper 2 cell
6
body of pancreas
6
embryonic stem cell
6
heart right ventricle
6
kidney interstitial cell
6
mononuclear cell
6
subcutaneous adipose tissue
6
temporal lobe
6
tibial nerve
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
alternatively activated macrophage
5
aorta
5
caudate nucleus
5
mesangial cell
5
natural killer cell
5
ovary
5
sigmoid colon
5
trophoblast cell
4
CD14-positive monocyte
4
CD8-positive, alpha-beta T cell
4
T cell
4
angular gyrus
4
ascending aorta
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cerebellum
4
chorionic villus
4
coronary artery
4
endocrine pancreas
4
fibroblast of lung
4
frontal cortex
4
gamma-delta T cell
4
gastrocnemius medialis
4
inflammatory macrophage
4
layer of hippocampus
4
mesenchymal stem cell
4
muscle of trunk
4
nephron progenitor
4
omental fat pad
4
psoas muscle
4
retina
4
right atrium auricular region
4
right cardiac atrium
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
skeletal muscle tissue
4
substantia nigra
4
testis
4
thyroid gland
4
tibial artery
4
transverse colon
3
Adaptive / Maladaptive / Repairing Fibroblast
3
B Cell
3
CD4-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Fibroblast
3
HeLa-S3
3
M2 Macrophage
3
Mast Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Peyer's patch
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
immortal human breast epithelial cell line cell
3
kidney cell
3
kidney resident macrophage
3
memory B cell
3
mucosa of rectum
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
osteoblast
3
pancreas
3
smooth muscle cell
3
stomach smooth muscle
3
thoracic aorta
3
upper lobe of left lung
3
vagina
2
22Rv1
2
Ammon's horn
2
Brodmann (1909) area 46
2
ESC derived cell line
2
GM12878
2
HepG2
2
KARPAS-422 cell
2
Kupffer cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T follicular helper cell
2
T47D
2
astrocyte
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endodermal cell
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
germinal matrix
2
hepatic stellate cell
2
left renal cortex interstitium
2
left renal pelvis
2
leukocyte
2
limb
2
lower leg skin
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
naive B cel
2
neural cell
2
neutrophil
2
occipital lobe
2
pancreatic stellate cell
2
parathyroid adenoma
2
prostate gland
2
putamen
2
rectum smooth muscle tissue
2
right lobe of liver
Life stage
1
adult
1
child
Date released
2
May, 2021
1
August, 2021
1
May, 2022
Software used
3
r
1
chromhmm
1
seurat
Lab
3
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
4
AMP
RFA
3
AMP
1
AMP2
organ_slims!
epithelium
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR271DAI
released
Annotation file set
: Chromatin state of CD8-positive, alpha-beta T cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR072FLD
released
Annotation file set
: GSE118165 gene expression annotation of normal CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579KZW
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR512ARP
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for CD8-positive, alpha-beta T cell
Lab:
Katalin Susztak, Upenn
Project:
AMP