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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
4
cis-regulatory elements
1
Gene expression levels
Annotation type Category
4
ChIP-seq
2
DNase-seq
1
RNA-seq
Available data
4
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
25
kidney
22
stomach
21
heart
20
breast cancer cell
17
brain
17
lung
17
muscle of arm
15
large intestine
15
muscle of back
15
placenta
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
muscle of leg
14
small intestine
13
left lung
12
neuroblastoma cell
11
cardiomyocytes
11
gastric cancer cell
11
hematopoietic multipotent progenitor cell
10
diffuse intrinsic pontine glioma
10
renal cortex interstitium
10
right lung
10
thymus
9
Rhabdomyosarcoma
9
cardiac muscle cell
9
islet of Langerhans
9
left kidney
9
liposarcoma
9
liver
9
renal pelvis
8
CD4-positive, alpha-beta T cell
8
MCF-7
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
foreskin fibroblast
8
induced pluripotent stem cell
8
neuronal stem cell
8
right kidney
8
spleen
7
B cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
fibroblast cell line
7
hESC cell
7
heart left ventricle
7
neuroblastoma cell line
7
spinal cord
6
Chondroid Chordoma
6
H9
6
acute myeloid leukemia
6
kidney interstitial cell
6
melanoma
6
natural killer cell
6
neural progenitor cell
6
osteoblast
5
A549
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
adipocyte
5
adipose tissue
5
diffuse large B-cell lymphoma
5
embryonic stem cell
5
esophageal squamous cell carcinoma
5
foreskin melanocyte
5
glioblastoma multiforme cancer stem cell
5
osteosarcoma
5
prostate cancer cell line
5
testis
4
22Rv1
4
CD14-positive monocyte
4
HEK293
4
HS-SY-2 cell
4
HepG2
4
Jurkat
4
LNCAP
4
Mantle cell lymphoma
4
Peyer's patch
4
RS4-11 cell
4
Rh-4 cell
4
T-cell
4
Th1 cell
4
Tumor-derived cell line
4
WI38
4
body of pancreas
4
bone tissue
4
chorionic villus
4
colon adenocarcinoma
4
dermal fibroblast
4
endodermal cell
4
erythroid progenitor cell
4
gastroesophageal sphincter
4
glioblastoma cell
4
glioma cell
4
immortal neural cell line cell
4
layer of hippocampus
4
left renal pelvis
4
lower leg skin
4
lymphoblastoid cell line
4
melanoma cell
4
mesenchymal stem cell
4
mesodermal cell
4
nephron progenitor
4
pancreas
4
right renal pelvis
4
sigmoid colon
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
GM06990
3
GM12864
3
GM12865
3
GM12873
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
Ishikawa
3
K562
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
SK-N-DZ
3
SK-N-MC
3
SW480
3
T-helper 1 cell
3
WERI-Rb-1
3
adult endothelial progenitor cell
3
ascending aorta
3
cardiac fibroblast
3
cardiac precursors (cardiac muscle cell)
3
caudate nucleus
3
chronic lymphocytic leukemia cell
3
colonic mucosa
3
endocrine pancreas
3
epithelial ovarian cancer cell
3
esophagus muscularis mucosa
3
fibroblast
3
fibroblast of cardiac tissue
3
fibroblast of lung
3
fibroblast of mammary gland
3
gastrocnemius medialis
3
hematopoietic cell
3
hepatic stellate cell
3
kidney cell
3
kidney resident macrophage
3
left renal cortex interstitium
3
leukemic stem cell
3
lung fibroblast cell line
3
lymphoblast
3
mammary epithelial cell
3
mesangial cell
3
mesendoderm
3
metastatic melanoma
3
mononuclear cell of bone marrow
3
muscle of trunk
3
myotube
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
subcutaneous adipose tissue
3
trophoblast cell
2
143B
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A-673 cell
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
AGS cell
2
ALL-SIL cell
2
Adipose stromal cell
2
AsPC-1 cell
2
B-cell lymphoma cell
2
BCBL-1 cell
2
BE(2)-C
2
BEAS-2B cell
2
BG03
Organ
5
connective tissue
Life stage
2
adult
1
unknown
Date released
6
September, 2022
5
February, 2021
4
August, 2017
4
February, 2024
4
May, 2021
1
June, 2020
1
November, 2021
1
November, 2022
1
October, 2019
Software used
2
encode-ccres
2
macs
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
epithelium
Showing 5 of 5 results
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Download
FileSet
DSR356IFR
released
Annotation file set
: Gene expression annotation of adipocyte from abdominal and gluteo-femoral preadipocytes of GSE118500 for GSE118497
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810TFD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR462QHF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014GTX
released
Annotation file set
: Histone modifications annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR389QIM
released
Annotation file set
: Binding sites annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP