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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
gene expression
Annotation Category
2
Target gene links
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
snRNA-seq
Available data
4
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
primary cell
Biosample term
41
heart
39
stomach
36
A549
35
kidney
33
brain
33
lung
32
muscle of arm
30
small intestine
29
adrenal gland
28
placenta
26
common myeloid progenitor, CD34-positive
26
large intestine
26
left lung
26
muscle of back
26
muscle of leg
22
right lung
22
thymus
21
hematopoietic multipotent progenitor cell
20
right kidney
18
B cell
18
CD4-positive, alpha-beta memory T cell
18
left kidney
18
renal cortex interstitium
18
renal pelvis
16
liver
15
adipose tissue
15
monocyte
15
neural progenitor cell
14
CD8-positive, alpha-beta memory T cell
14
spinal cord
13
T-helper 1 cell
13
T-helper 17 cell
13
islet of Langerhans
13
regulatory T cell
13
spleen
12
K562
12
mononuclear cell
11
cardiomyocytes
11
heart left ventricle
10
H1-hESC
10
MCF-7
10
body of pancreas
10
sigmoid colon
10
trophoblast cell
9
T-helper 2 cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
ovary
9
progenitor cell of endocrine pancreas
8
CD14-positive monocyte
8
T cell
8
chorionic villus
8
endocrine pancreas
8
gastrocnemius medialis
8
muscle of trunk
8
natural killer cell
8
psoas muscle
8
thyroid gland
8
tibial nerve
8
transverse colon
7
caudate nucleus
7
heart right ventricle
7
retina
7
skeletal muscle tissue
7
testis
6
HeLa-S3
6
Peyer's patch
6
adipocyte
6
cerebellum
6
chorion membrane
6
endometrium adenocarcinoma
6
fibroblast of cardiac tissue
6
fibroblast of dermis
6
fibroblast of lung
6
frontal cortex
6
immortal human breast epithelial cell line cell
6
kidney interstitial cell
6
layer of hippocampus
6
naive T cell
6
neurosphere
6
omental fat pad
6
right atrium auricular region
6
upper lobe of left lung
5
aorta
5
ascending aorta
5
coronary artery
5
mesangial cell
5
mesenchymal stem cell
5
pancreatic stellate cell
5
skeletal muscle myoblast
5
subcutaneous adipose tissue
5
substantia nigra
5
temporal lobe
5
tibial artery
5
vagina
4
22Rv1
4
Brodmann (1909) area 46
4
LNCaP clone FGC
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
4
T47D
4
angular gyrus
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
esophagus
4
esophagus muscularis mucosa
4
eye
4
fibroblast of breast
4
foreskin fibroblast
4
gamma-delta T cell
4
left renal cortex interstitium
4
left renal pelvis
4
limb
4
lower leg skin
4
mucosa of rectum
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
nephron progenitor
4
neutrophil
4
osteoblast
4
pancreas
4
pancreatic MUC5B+ductal cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
parathyroid adenoma
4
prostate gland
4
right renal cortex interstitium
4
right renal pelvis
4
skeletal muscle satellite cell
4
skin fibroblast
4
smooth muscle cell
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
urinary bladder
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Ammon's horn
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Fibroblast
3
M2 Macrophage
3
Mast Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
astrocyte
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
hepatic stellate cell
3
kidney cell
3
kidney resident macrophage
3
left cardiac atrium
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neural cell
3
occipital lobe
3
pancreatic quiescent stellate cell
3
putamen
3
right cardiac atrium
3
right lobe of liver
3
uterus
2
8988T
2
A172
2
A673
2
ACC112
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08395 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
Organ
5
connective tissue
Life stage
2
adult
2
embryonic
Date released
4
September, 2022
1
February, 2024
Software used
5
macs
5
r
3
chromhmm
2
encode-ccres
1
abc
1
deeptools
1
eigenmt
1
nospecificsoft_customcode
1
qTLtools
1
rasqual
1
samtools
1
umitools
Lab
4
AMP-T2D consortium
1
Stephen Parker, UMich
Project
5
AMP
RFA
4
AMP
1
AMP2
organ_slims!
epithelium
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR902OPF
released
Annotation file set
: Candidate regulatory elements for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR329XEJ
released
Annotation file set
: Candidate regulatory elements for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR391CWH
released
Annotation file set
: Target gene predictions for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR543XVO
released
Annotation file set
: Cell type gene expression mean TPM and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP