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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
bed bed3+
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
28
islet of Langerhans
24
heart
23
kidney
21
monocyte
21
stomach
20
brain
18
A549
18
lung
17
liver
16
adrenal gland
16
induced pluripotent stem cell
16
muscle of arm
16
small intestine
15
muscle of leg
15
placenta
14
subcutaneous adipose tissue
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
adipose tissue
12
neural progenitor cell
12
regulatory T cell
11
T-helper 1 cell
11
T-helper 17 cell
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
B cell
10
heart left ventricle
9
CD4-positive, alpha-beta memory T cell
9
H1-hESC
9
body of pancreas
9
caudate nucleus
9
cerebellum
9
extended pluripotent stem (EPS) cells
9
left kidney
9
macrophage
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
ascending aorta
8
coronary artery
8
frontal cortex
8
omental fat pad
8
putamen
8
right atrium auricular region
8
spinal cord
8
spleen
8
substantia nigra
8
tibial artery
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
7
embryonic stem cell
7
mature neutrophil
6
K562
6
T cell
6
heart right ventricle
6
kidney interstitial cell
6
lymphoblastoid cell line
6
mononuclear cell
6
natural killer cell
6
neutrophil
6
ovary
6
skeletal muscle tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Ammon's horn
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Fibroblast
5
M2 Macrophage
5
MCF-7
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
alternatively activated macrophage
5
amygdala
5
anterior cingulate cortex
5
gastrocnemius medialis(Muscle - Skeletal)
5
hypothalamus
5
left ventricle myocardium
5
mesangial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
nucleus accumbens
5
pancreatic stellate cell
5
retina
5
right lobe of liver
5
sigmoid colon
5
temporal lobe
5
testis
5
thyroid gland
5
transverse colon
5
trophoblast cell
4
C1 segment of cervical spinal cord
4
CD14-positive monocyte
4
CD8-positive, alpha-beta T cell
4
adipocyte
4
angular gyrus
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cerebellum (Hemisphere)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
gamma-delta T cell
4
gastrocnemius medialis
4
inflammatory macrophage
4
layer of hippocampus
4
mesenchymal stem cell
4
muscle of trunk
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
psoas muscle
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
skin of body
4
vagina
4
visceral abdominal adipose tissue
3
CD4-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
HeLa-S3
3
Mast Cell
3
Peyer's patch
3
T follicular helper cell
3
adult endothelial progenitor cell
3
aorta
3
blood cell
3
cartilage tissue
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
kidney cell
3
kidney resident macrophage
3
left renal cortex interstitium
3
memory B cell
3
naive B cel
3
naive T cell
3
neurosphere
3
osteoblast
3
pancreas
3
pancreatic quiescent stellate cell
3
prostate gland
3
right cardiac atrium
3
right renal cortex interstitium
3
smooth muscle cell
3
thoracic aorta
3
upper lobe of left lung
3
uterus
2
22Rv1
2
Brodmann (1909) area 46
2
KARPAS-422 cell
2
Kupffer cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipose-derived stem cell
2
articular chondrocyte
2
astrocyte
2
blood
2
cingulate gyrus
2
colonic mucosa
2
differentiating adipose-derived stem cell
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
Life stage
1
embryonic
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
organ_slims!
epithelium
month_released!
January, 2020
files.file_type!
bed bed3+
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR387DPA
released
Annotation file set
: Chromatin states for BSS01263 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP