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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
90
heart
84
stomach
81
kidney
73
brain
68
lung
67
muscle of arm
63
HeLa-S3
62
small intestine
61
A549
60
adrenal gland
59
placenta
57
muscle of leg
55
large intestine
54
muscle of back
53
H1-hESC
53
common myeloid progenitor, CD34-positive
52
left lung
51
neural progenitor cell
48
liver
47
thymus
45
right lung
42
hematopoietic multipotent progenitor cell
42
islet of Langerhans
42
right kidney
41
B cell
40
K562
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
34
heart left ventricle
34
spinal cord
32
CD4-positive, alpha-beta memory T cell
32
fibroblast
32
spleen
30
adipose tissue
30
macrophage
26
regulatory T cell
25
MCF-7
25
tibial nerve
24
smooth muscle cell
23
body of pancreas
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
adipocyte
22
caudate nucleus
22
natural killer cell
22
pericyte cell
22
sigmoid colon
21
T-helper 1 cell
21
pancreas
21
subcutaneous adipose tissue
20
breast cancer cell
20
mononuclear cell
20
trophoblast cell
19
T-helper 17 cell
19
coronary artery
19
heart right ventricle
19
ovary
19
psoas muscle
19
right atrium auricular region
18
HFFc6
18
foreskin fibroblast
18
mesenchymal stem cell
18
substantia nigra
18
tibial artery
17
CD8-positive, alpha-beta T cell
17
gastrocnemius medialis
17
omental fat pad
17
testis
17
thyroid gland
17
transverse colon
16
CD14-positive monocyte
16
HepG2
16
astrocyte
16
cardiac muscle cell
16
chorionic villus
16
fibroblast of cardiac tissue
16
layer of hippocampus
16
muscle of trunk
16
osteoblast
16
skeletal muscle tissue
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
GM12878
15
T-helper 2 cell
15
ascending aorta
15
cerebellum
15
fibroblast of lung
15
frontal cortex
15
induced pluripotent stem cell
15
skeletal muscle myoblast
14
endocrine pancreas
14
prostate gland
14
putamen
13
H9
13
Peyer's patch
13
aorta
13
excitatory neuron
13
neurosphere
13
skeletal muscle satellite cell
13
temporal lobe
12
Ammon's horn
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
monocyte
12
neuroblastoma cell
11
fibroblast of dermis
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
gastric cancer cell
10
hepatic stellate cell
10
lymphocyte
10
neutrophil
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
skin fibroblast
10
thoracic aorta
10
trophoblast
9
HEK293
9
SK-N-DZ
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
erythroblast
9
esophagus
9
liposarcoma
9
neuronal stem cell
9
parathyroid adenoma
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM12865
8
NAMALWA cell
8
cingulate gyrus
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
naive T cell
8
skeletal muscle fiber
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
HT-29
7
IMR-90
7
SK-N-MC
7
SK-N-SH
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
mature neutrophil
7
mesendoderm
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
right lobe of liver
7
stomach smooth muscle
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
6
GM10248
6
GM23248
6
HUES8
6
SJSA1
6
SW480
6
WI38
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
organ_slims!
epithelium
month_released!
May, 2021
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP