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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
60
placenta
23
trophoblast cell
16
chorionic villus
10
chorion membrane
8
fibroblast of villous mesenchyme
6
umbilical cord
4
amnion
3
HTR-8/Svneo
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
epithelial cell of amnion
2
chorion
1
amniotic epithelial cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
trophoblast giant cell
Organ
4
extraembryonic component
Life stage
4
embryonic
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
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Showing 4 of 4 results
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Download
FileSet
DSR419OOH
released
Annotation file set
: Candidate regulatory elements for BSS00074 amnion from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR070RBK
released
Annotation file set
: Target gene predictions for BSS00074 amnion from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR673QIZ
released
Annotation file set
: Chromatin states for BSS00074 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR896FWW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE amnion
Lab:
AMP-T2D consortium
Project:
AMP