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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
gene expression
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Gene expression levels
1
Target gene links
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
23
heart
22
stomach
21
kidney
18
adrenal gland
18
lung
17
brain
16
muscle of arm
15
placenta
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
islet of Langerhans
11
adipose tissue
11
liver
11
right lung
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spleen
8
heart left ventricle
8
psoas muscle
8
spinal cord
7
body of pancreas
7
ovary
6
heart right ventricle
5
aorta
5
gastrocnemius medialis
5
muscle of trunk
5
pancreas
5
subcutaneous adipose tissue
5
thyroid gland
5
tibial nerve
4
bone tissue
4
caudate nucleus
4
cerebellum
4
chorionic villus
4
coronary artery
4
endocrine pancreas
4
frontal cortex
4
omental fat pad
4
retina
4
right atrium auricular region
4
skeletal muscle tissue
4
testis
3
Ammon's horn
3
ascending aorta
3
breast epithelium
3
chorion membrane
3
esophagus
3
layer of hippocampus
3
right cardiac atrium
3
substantia nigra
3
temporal lobe
3
tibial artery
3
trophoblast
3
upper lobe of left lung
3
uterus
3
vagina
2
Brodmann (1909) area 46
2
angular gyrus
2
cingulate gyrus
2
dorsolateral prefrontal cortex
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
left cardiac atrium
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
occipital lobe
2
parathyroid adenoma
2
prostate gland
2
putamen
2
right lobe of liver
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
thoracic aorta
2
tongue
2
urinary bladder
2
visceral abdominal adipose tissue
1
C1 segment of cervical spinal cord
1
amnion
1
amygdala
1
anterior cingulate cortex
1
aortic valve
1
arm bone
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast - mammary tissue
1
cardiac ventricle
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
diencephalon
1
embryonic facial prominence
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
fallopian tube
1
femur
1
gastric (mucosa of stomach)
1
gastrocnemius medialis(Muscle - Skeletal)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
globus pallidus
1
hypothalamus
1
inferior parietal cortex
1
kidney - cortex
1
kidney - medulla
1
left ventricle myocardium
1
leg bone
1
medulla oblongata
1
metanephros
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
mitral valve
1
mucosa of stomach
1
nucleus accumbens
1
parietal lobe
1
pituitary
1
pons
1
prostate
1
pulmonary valve
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
skin of body
1
superior temporal gyrus
1
thyroid
1
tricuspid valve
1
umbilical cord
1
white adipose tissue
1
whole blood
Life stage
1
adult
1
fetal
Date released
1
February, 2020
1
September, 2022
Software used
2
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
intestine
Showing 2 of 2 results
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Download
FileSet
DSR357LUY
released
Annotation file set
: Target gene predictions for BSS01388 occipital lobe from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271PLC
released
Annotation file set
: Gene expression levels of Brain occipital lobe from RNA-seq (ENCODE) fetal
Lab:
AMP-T2D consortium
Project:
AMP