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Schema
Citing CMDGA
Clear Filters
Annotation type
43
target gene predictions
9
candidate regulatory elements
8
gene expression
6
chromatin state
2
binding sites
1
accessible chromatin
1
histone modifications
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
5
bed bed9
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
5
GRCh38
Organism
6
Homo sapiens
Biosample type
4
tissue
1
cell line
1
stem cell
Biosample term
19
heart
19
stomach
18
A549
16
brain
16
lung
16
muscle of arm
14
adrenal gland
14
kidney
14
placenta
13
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of back
13
muscle of leg
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
liver
7
CD8-positive, alpha-beta memory T cell
7
K562
7
mature neutrophil
7
spinal cord
6
adipocyte
6
adipose tissue
6
left cardiac atrium
6
mononuclear cell
6
spleen
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
heart left ventricle
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
body of pancreas
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
fibroblast of lung
4
foreskin keratinocyte
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
psoas muscle
4
thyroid gland
3
CD4-positive, alpha-beta T cell
3
HeLa-S3
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
chorion membrane
3
cingulate gyrus
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
heart right ventricle
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
keratinocyte
3
mammary gland epithelial cell
3
naive T cell
3
natural killer cell
3
neurosphere
3
regulatory T cell
3
retina
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
stomach smooth muscle
3
substantia nigra
3
temporal lobe
3
testis
3
tibial nerve
3
upper lobe of left lung
2
22Rv1
2
Brodmann (1909) area 46
2
ESC derived cell line
2
GM12878
2
H1-hESC
2
HepG2
2
KARPAS-422 cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
angular gyrus
2
aorta
2
ascending aorta
2
breast epithelium
2
bronchial epithelial cell
2
cerebellum
2
coronary artery
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
frontal cortex
2
hepatocyte
2
islet of Langerhans
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mesenchymal stem cell
2
muscle cell
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skin fibroblast
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DG-75 cell
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
H9
1
HAP-1
1
HEK293
1
HEK293T
1
HK-2 cell
Organ
6
embryo
4
extraembryonic component
Life stage
6
embryonic
Date released
5
September, 2022
1
August, 2017
Software used
6
chromhmm
Lab
5
AMP-T2D consortium
1
Stephen Parker, UMich
Project
6
AMP
RFA
6
AMP
organ_slims!
intestine
files.file_type!
bigBed bed9
Showing 6 of 6 results
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Download
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR409IHE
released
Annotation file set
: Chromatin states for BSS00217 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR753EVM
released
Annotation file set
: Chromatin states for BSS00216 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR056LGM
released
Annotation file set
: Chromatin states for BSS00215 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR260LUQ
released
Annotation file set
: Chromatin states for BSS00214 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP