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Schema
Citing CMDGA
Clear Filters
Annotation type
13
gene expression
5
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
5
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
1
endothelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
proximal tubule cells with injury markers
Organ
kidney
8
epithelium
Life stage
5
adult
Date released
5
August, 2021
Software used
5
macs
Lab
539
AMP-T2D consortium
225
Bing Ren, UCSD
49
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
12
Stephen Parker, UMich
9
Ines Cebola, Imperial College London
5
Katalin Susztak, Upenn
3
Struan F.A. Grant, CHOP
1
Karen Mohlke, UNC
1
Stephen S. Rich Lab @UVA
Project
5
AMP
RFA
5
AMP2
organ_slims!
kidney
Showing 5 of 5 results
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Download
FileSet
DSR121DOH
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Lymphcytes
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR141HHS
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Immune cells
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR299ZMD
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Injured PT (Havcr1)
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR493PXL
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Endothelial cells
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR914ZWA
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of PT-S1 & PT-S3 cells
Lab:
Katalin Susztak, Upenn
Project:
AMP