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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
ChIP-seq
Available data
2
bed bed3+
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
103
monocyte
35
CD8-positive, alpha-beta T cell
34
neural progenitor cell
26
retina
24
heart
22
brain
21
A549
20
breast cancer cell
20
fibroblast
20
pigmented layer of retina
20
stomach
19
endothelial cell
17
placenta
16
B cell
16
embryonic stem cell
15
lung
15
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
13
adipocyte
13
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
large intestine
13
liver
13
macrophage
13
muscle of back
12
hepatocyte
12
left lung
12
neuroblastoma cell
11
HepG2
11
T cell
11
endothelial cell of hepatic sinusoid
11
hematopoietic multipotent progenitor cell
11
keratinocyte
11
pericyte cell
11
thymus
10
EndoC_BH1
10
K562
10
MCF-7
10
astrocyte
10
gastric cancer cell
10
islet of Langerhans
10
right lung
9
CD4-positive, alpha-beta memory T cell
9
Rhabdomyosarcoma
9
adipose tissue
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
pancreatic ductal cell
9
retinal pigment epithelial cell
9
smooth muscle cell
9
spinal cord
8
T-cell acute lymphoblastic leukemia
8
erythroblast
8
heart left ventricle
8
pancreatic beta cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta memory T cell
7
cardiac muscle cell
7
chondrocyte
7
esophageal adenocarcinoma
7
fibroblast cell line
7
fibroblast of cardiac tissue
7
mature neutrophil
7
pancreatic acinar cell
6
Chondroid Chordoma
6
acute myeloid leukemia
6
foreskin fibroblast
6
hESC cell
6
natural killer cell
6
neuroblastoma cell line
6
osteoblast
6
regulatory T cell
6
skeletal muscle satellite cell
6
spleen
5
CD14-positive, CD16-negative classical monocyte
5
Ewing sarcoma
5
GM12878
5
H1-hESC
5
SGBS preadipocytes
5
T-helper 1 cell
5
T-helper 17 cell
5
T-helper 2 cell
5
bronchial epithelial cell
5
caudate nucleus
5
endothelial cell of umbilical vein
5
esophageal squamous cell carcinoma
5
foreskin keratinocyte
5
mammary epithelial cell
5
mammary gland epithelial cell
5
osteosarcoma
5
prostate cancer cell line
5
prostate gland
5
temporal lobe
4
22Rv1
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
BE(2)-C
4
BJ cell
4
CD14-positive monocyte
4
CD4-positive, alpha-beta T cell
4
Caco-2 cell
4
GM06990
4
GM12864
4
GM12865
4
GM12875
4
GM12891
4
GM12892
4
GM19238
4
GM19239
4
GM19240
4
HL-60
4
HS-SY-2 cell
4
HeLa-S3
4
IMR-90
4
Jurkat
4
KARPAS-422 cell
4
Mantle cell lymphoma
4
NAMALWA cell
4
NT2-D1 cell
4
RS4-11 cell
4
Rh-4 cell
4
SK-N-MC
4
Th1 cell
4
Tumor-derived cell line
4
WERI-Rb-1
4
adipose-derived stem cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
aortic endothelial cell
4
chorionic villus
4
choroid plexus epithelial cell
4
colon adenocarcinoma
4
coronary artery
4
dermal fibroblast
4
dermis lymphatic vessel endothelial cell
4
diffuse large B-cell lymphoma
4
endodermal cell
4
epithelial cell of prostate
4
fibroblast of lung
4
fibroblast of villous mesenchyme
4
left cardiac atrium
4
mesenchymal stem cell
4
mononuclear cell
4
neuronal stem cell
4
pancreatic alpha cell
4
pancreatic delta cell
4
skeletal muscle myoblast
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
DND-41 cell
3
GM08714
3
GM10847
3
GM12872
3
GM12873
3
GM18505
3
GM18526
3
GM18951
3
GM19099
3
GM19193
3
GM23248
3
HAC cell
3
HAP-1
3
HBMEC cell
3
HCT-116 cell
3
HEK293-T-REx cell
3
HK-2 cell
3
HT-29
3
HuH-7
3
LHCN-M2
3
LoVo cell
3
MG63
3
MM.1S
3
NHEK
3
Normal Human Astrocytes
3
OCI-LY1
3
OCI-LY7
3
PANC-1 cell
3
PC-3
3
PC-9
3
Peyer's patch
3
RPMI8226
3
RWPE1
3
Raji cell
3
SAEC
3
SH-SY5Y cell
3
SK-N-DZ
Date released
2
February, 2021
2
February, 2024
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
kidney
annotation_type_category!
DNase-seq
Showing 4 of 4 results
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Download
FileSet
DSR482VBC
released
Annotation file set
: Accessible chromatin of drastic dynamically reformed during the adipogenesis of hASCs, 24 hour
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR629NXL
released
Annotation file set
: Accessible chromatin of drastic dynamically reformed during the adipogenesis of hASCs, 0 hour
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR688DKK
released
Annotation file set
: Histone modifications annotation for Adipocyte Adipose_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR993NEB
released
Annotation file set
: Binding sites annotation for Adipocyte Adipose_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP