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Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
candidate regulatory elements
1
target gene predictions
Annotation Category
2
Gene expression levels
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
2
RNA-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
41
heart
39
stomach
36
A549
33
brain
33
lung
32
muscle of arm
30
small intestine
29
adrenal gland
28
placenta
26
common myeloid progenitor, CD34-positive
26
large intestine
26
left lung
26
muscle of back
26
muscle of leg
22
right lung
22
thymus
21
hematopoietic multipotent progenitor cell
18
B cell
18
CD4-positive, alpha-beta memory T cell
16
liver
15
adipose tissue
15
monocyte
15
neural progenitor cell
14
CD8-positive, alpha-beta memory T cell
14
spinal cord
13
T-helper 1 cell
13
T-helper 17 cell
13
islet of Langerhans
13
regulatory T cell
13
spleen
12
K562
12
hepatocyte
12
mononuclear cell
11
cardiomyocytes
11
heart left ventricle
10
H1-hESC
10
MCF-7
10
body of pancreas
10
endothelial cell
10
sigmoid colon
10
trophoblast cell
9
T-helper 2 cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
ovary
9
pancreatic ductal cell
9
progenitor cell of endocrine pancreas
8
CD14-positive monocyte
8
EndoC_BH1
8
T cell
8
chorionic villus
8
endocrine pancreas
8
foreskin keratinocyte
8
gastrocnemius medialis
8
muscle of trunk
8
natural killer cell
8
psoas muscle
8
thyroid gland
8
tibial nerve
8
transverse colon
7
caudate nucleus
7
heart right ventricle
7
retina
7
skeletal muscle tissue
7
testis
6
HeLa-S3
6
Peyer's patch
6
adipocyte
6
cerebellum
6
chorion membrane
6
endometrium adenocarcinoma
6
fibroblast of cardiac tissue
6
fibroblast of dermis
6
fibroblast of lung
6
frontal cortex
6
immortal human breast epithelial cell line cell
6
layer of hippocampus
6
mammary gland epithelial cell
6
naive T cell
6
neurosphere
6
omental fat pad
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
right atrium auricular region
6
upper lobe of left lung
5
aorta
5
ascending aorta
5
coronary artery
5
mesangial cell
5
mesenchymal stem cell
5
pancreatic stellate cell
5
skeletal muscle myoblast
5
subcutaneous adipose tissue
5
substantia nigra
5
temporal lobe
5
tibial artery
5
vagina
4
22Rv1
4
Brodmann (1909) area 46
4
LNCaP clone FGC
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
4
T47D
4
angular gyrus
4
bone tissue
4
breast epithelium
4
bronchial epithelial cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cingulate gyrus
4
colonic mucosa
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
duodenal mucosa
4
endodermal cell
4
endothelial cell of umbilical vein
4
epithelial cell of prostate
4
esophagus
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
eye
4
fibroblast of breast
4
foreskin fibroblast
4
gamma-delta T cell
4
keratinocyte
4
limb
4
lower leg skin
4
mucosa of rectum
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
nephron progenitor
4
neutrophil
4
osteoblast
4
pancreas
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
parathyroid adenoma
4
prostate gland
4
skeletal muscle satellite cell
4
skin fibroblast
4
smooth muscle cell
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
urinary bladder
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Ammon's horn
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Fibroblast
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Regulatory T Cell
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
astrocyte
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
hepatic stellate cell
3
hepatocyte(AFP)
3
left cardiac atrium
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neural cell
3
occipital lobe
3
pancreatic quiescent stellate cell
3
putamen
Organ
4
connective tissue
Life stage
3
unknown
1
adult
Date released
2
September, 2022
1
February, 2021
1
November, 2020
Software used
9
macs
4
r
2
chromhmm
1
abc
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
kidney
Showing 4 of 4 results
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Download
FileSet
DSR292OXQ
released
Annotation file set
: Candidate regulatory elements for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR608JCL
released
Annotation file set
: Target gene predictions for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703WRC
released
Annotation file set
: Gene expression annotation of osteoporosis cell from 4 cell lines for GSE120755 RNA-seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR204TLG
released
Annotation file set
: Gene expression annotation of E-MTAB-6835 - RNA-seq of primary mesenchymal stem cells -derived osteoblasts (differentiated with BMP2) from 3 human donors
Lab:
AMP-T2D consortium
Project:
AMP