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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
0
tissue
Biosample term
40
stomach
37
heart
33
lung
33
muscle of arm
29
brain
29
small intestine
28
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
20
thymus
15
spleen
14
B cell
14
CD4-positive, alpha-beta memory T cell
14
spinal cord
13
liver
11
foreskin keratinocyte
11
heart left ventricle
10
sigmoid colon
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
thyroid gland
8
transverse colon
7
CD8-positive, alpha-beta T cell
7
Peyer's patch
7
adipose tissue
7
endocrine pancreas
7
mononuclear cell
7
neurosphere
7
psoas muscle
7
testis
7
trophoblast cell
7
upper lobe of left lung
6
T-helper 1 cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
fibroblast of lung
6
foreskin fibroblast
6
heart right ventricle
6
layer of hippocampus
6
lower leg skin
6
natural killer cell
6
retina
6
skeletal muscle tissue
6
tibial nerve
5
T-helper 17 cell
5
T-helper 2 cell
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
omental fat pad
5
pancreas
5
parathyroid adenoma
5
regulatory T cell
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
T cell
4
T-cell
4
angular gyrus
4
aorta
4
ascending aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
epithelial cell of prostate
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle myoblast
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
cardiac fibroblast
3
cerebellum
3
chorion membrane
3
coronary artery
3
fibroblast of cardiac tissue
3
keratinocyte
3
limb
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
naive T cell
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
urinary bladder
3
uterus
2
Ammon's horn
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
amnion
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
brain microvascular endothelial cell
2
cardiac muscle cell
2
cerebellar cortex
2
chorion
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
femur
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
frontal cortex
2
germinal matrix
2
globus pallidus
2
iris pigment epithelial cell
2
left cardiac atrium
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
placental basal plate
2
pulmonary artery endothelial cell
2
putamen
2
retinal pigment epithelial cell
2
right cardiac atrium
2
right lobe of liver
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
skin fibroblast
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
2
subcutaneous adipose tissue
2
umbilical cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
amnion mesenchymal stem cell
1
amniotic epithelial cell
1
amniotic stem cell
1
arm bone
1
brain pericyte
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic facial prominence
1
epidermal melanocyte
1
epithelial cell of amnion
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
forelimb muscle
1
germinal center
1
hepatic stellate cell
1
hepatocyte
1
hindlimb muscle
1
inferior parietal cortex
1
left leg bone
1
leg bone
1
luminal epithelial cell of mammary gland
1
mammary stem cell
1
medulla oblongata
1
mesenchymal stem cell
1
midbrain
1
occipital lobe
1
pericyte cell
1
pons
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
regular cardiac myocyte
1
right arm bone
1
skin of body
1
superior temporal gyrus
Organ
2
connective tissue
2
eye
Life stage
2
unknown
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
kidney
Showing 2 of 2 results
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Download
FileSet
DSR132SMN
released
Annotation file set
: Candidate regulatory elements for BSS00349 fibroblast of the conjunctiva from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758XPL
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of the conjunctiva
Lab:
AMP-T2D consortium
Project:
AMP