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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
39
Target gene links
8
Gene expression levels
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
105
monocyte
44
heart
44
stomach
42
CD8-positive, alpha-beta T cell
42
kidney
35
brain
35
neural progenitor cell
34
muscle of arm
33
lung
31
retina
30
placenta
30
small intestine
29
adrenal gland
29
muscle of leg
27
common myeloid progenitor, CD34-positive
27
muscle of back
26
left lung
24
A549
24
B cell
23
right lung
22
hematopoietic multipotent progenitor cell
22
thymus
21
renal cortex interstitium
21
renal pelvis
21
right kidney
20
breast cancer cell
20
pigmented layer of retina
18
endothelial cell
18
fibroblast
18
left kidney
18
liver
18
spinal cord
17
spleen
16
hepatocyte
15
heart left ventricle
15
macrophage
14
CD4-positive, alpha-beta memory T cell
14
MCF-7
14
foreskin keratinocyte
13
retinal pigment epithelial cell
12
excitatory neuron
12
neuroblastoma cell
11
HepG2
11
T cell
11
cardiac muscle cell
11
embryonic stem cell
11
endothelial cell of hepatic sinusoid
11
foreskin fibroblast
11
keratinocyte
11
pancreas
11
pericyte cell
10
EndoC_BH1
10
K562
10
Rhabdomyosarcoma
10
adipocyte
10
gastric cancer cell
10
mammary epithelial cell
10
natural killer cell
10
pancreatic ductal cell
10
regulatory T cell
10
smooth muscle cell
10
trophoblast cell
10
upper lobe of left lung
9
CD4-positive, alpha-beta T cell
9
adipose tissue
9
astrocyte
9
diffuse intrinsic pontine glioma
9
fibroblast of cardiac tissue
9
liposarcoma
9
mesenchymal stem cell
9
neuronal stem cell
8
CD14-positive monocyte
8
CD8-positive, alpha-beta memory T cell
8
Peyer's patch
8
T-helper 1 cell
8
bronchial epithelial cell
8
caudate nucleus
8
endothelial cell of umbilical vein
8
osteoblast
8
ovary
8
pancreatic beta cell
8
psoas muscle
8
thyroid gland
8
tibial nerve
7
B-lymphoblastoid cell line
7
H9
7
body of pancreas
7
chorionic villus
7
esophageal adenocarcinoma
7
fibroblast cell line
7
gastrocnemius medialis
7
islet of Langerhans
7
mononuclear cell
7
pancreatic acinar cell
7
prostate gland
7
skeletal muscle myoblast
7
testis
6
22Rv1
6
Chondroid Chordoma
6
HEK293
6
Rh-4 cell
6
SGBS preadipocytes
6
T-helper 17 cell
6
chondrocyte
6
hESC cell
6
layer of hippocampus
6
mammary gland epithelial cell
6
neuroblastoma cell line
6
neurosphere
6
right renal pelvis
6
skeletal muscle satellite cell
6
skeletal muscle tissue
5
CD1c-positive myeloid dendritic cell
5
CMK
5
Ewing sarcoma
5
GM06990
5
GM12864
5
GM12865
5
GM12878
5
GM23248
5
HAP-1
5
HL-60
5
HeLa-S3
5
IMR-90
5
Jurkat
5
LHCN-M2
5
LNCAP
5
MG63
5
MM.1S
5
NAMALWA cell
5
OCI-LY7
5
PC-3
5
PC-9
5
RWPE1
5
SK-N-DZ
5
SK-N-MC
5
T-cell acute lymphoblastic leukemia
5
T-helper 2 cell
5
acute myeloid leukemia
5
esophagus muscularis mucosa
5
esophagus squamous epithelium
5
fibroblast of lung
5
heart right ventricle
5
hepatic stellate cell
5
kidney tubule cell
5
left renal cortex interstitium
5
lymphoblastoid cell line
5
muscle of trunk
5
omental fat pad
5
osteosarcoma
5
prostate cancer cell line
5
skin fibroblast
5
substantia nigra
5
temporal lobe
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
Ammon's horn
4
B-lymphocyte
4
BE(2)-C
4
BJ cell
4
COLO205
4
Caco-2 cell
4
Daoy
4
GM10248
4
GM10266
4
GM12875
4
GM19240
4
H1-hESC
4
HS-SY-2 cell
4
HUES6
4
HuH-7
4
Ishikawa
4
KARPAS-422 cell
4
KBM-7
4
LoVo cell
4
Mantle cell lymphoma
4
NT2-D1 cell
4
OCI-LY1
4
RPMI8226
4
RS4-11 cell
4
SJSA1
4
SK-N-SH
4
acute myeloid leukemia cell
4
angular gyrus
4
aortic endothelial cell
4
ascending aorta
4
breast epithelium
4
choroid plexus epithelial cell
4
coronary artery
4
diffuse large B-cell lymphoma
4
epithelial cell of prostate
4
erythroblast
4
erythroid cell
4
esophageal squamous cell carcinoma
4
fibroblast of pulmonary artery
4
foreskin melanocyte
4
globus pallidus
Organ
4
embryo
Life stage
1
embryonic
Date released
2
February, 2021
1
June, 2020
1
September, 2022
Software used
chromhmm
3
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
large intestine
software_used.software.name!
chromhmm
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188ZAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR165RXW
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP