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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
2
chromatin state
2
eQTL
2
gene expression
2
target gene predictions
2
variant allelic effects
Annotation Category
3
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
3
RNA-seq
2
ChIP-seq
Available data
3
tsv
2
bed bed9
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
21
heart
19
stomach
18
brain
16
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
14
placenta
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
heart left ventricle
7
body of pancreas
7
caudate nucleus
7
spinal cord
7
tibial nerve
6
adipose tissue
6
ascending aorta
6
coronary artery
6
left cardiac atrium
6
spleen
6
substantia nigra
6
tibial artery
5
cerebellum
5
frontal cortex
5
heart right ventricle
5
islet of Langerhans
5
omental fat pad
5
right atrium auricular region
5
sigmoid colon
5
temporal lobe
4
Ammon's horn
4
angular gyrus
4
aorta
4
chorionic villus
4
endocrine pancreas
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
ovary
4
psoas muscle
4
putamen
4
subcutaneous adipose tissue
4
thyroid gland
4
transverse colon
3
C1 segment of cervical spinal cord
3
Peyer's patch
3
amygdala
3
anterior cingulate cortex
3
cerebellum (Hemisphere)
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
duodenal mucosa
3
gastrocnemius medialis(Muscle - Skeletal)
3
hypothalamus
3
left ventricle myocardium
3
mucosa of rectum
3
nucleus accumbens
3
pancreas
3
retina
3
right cardiac atrium
3
skeletal muscle tissue
3
stomach smooth muscle
3
testis
3
thoracic aorta
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
breast epithelium
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
germinal matrix
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
muscle layer of colon
2
muscle layer of duodenum
2
parathyroid adenoma
2
prostate gland
2
rectum smooth muscle tissue
2
right renal cortex interstitium
2
right renal pelvis
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
amnion
1
arm bone
1
cerebellar cortex
1
embryonic facial prominence
1
femur
1
gastroesophageal sphincter
1
germinal center
1
globus pallidus
1
inferior parietal cortex
1
leg bone
1
medulla oblongata
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
mucosa of stomach
1
occipital lobe
1
pons
1
skeletal muscle
1
skin of body
1
subcutaneous abdominal adipose tissue
1
superior temporal gyrus
1
umbilical cord
1
uterus
Organ
5
heart
Life stage
5
adult
Date released
3
March, 2020
2
September, 2022
Software used
2
chromhmm
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
liver
Showing 5 of 5 results
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Download
FileSet
DSR833ICS
released
Annotation file set
: Chromatin states for BSS01507 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR354CGU
released
Annotation file set
: Chromatin states for BSS01506 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR883RDT
released
Annotation file set
: Fine-mapping results from DAPG of right atrium auricular region for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR461YWS
released
Annotation file set
: Fine-mapping results from CAVIAR of right atrium auricular region for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR947OJV
released
Annotation file set
: Fine-mapping results from CaVEMaN of right atrium auricular region for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP