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Schema
Citing CMDGA
Clear Filters
Annotation type
1540
candidate regulatory elements
1279
target gene predictions
973
histone modifications
898
accessible chromatin
873
chromatin state
808
binding sites
682
gene expression
170
eQTL
167
differential activity
139
variant allelic effects
74
Fine-mapped variants
5
hQTL
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
caQTL
1
representative DNase hypersensitivity sites
Annotation Category
2
Genetic variant effects
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
2
CD4-positive helper T cell
Date released
2
October, 2022
Software used
rasqual
6
eigenmt
2
matrix-eQTL
Lab
2
Stephen S. Rich Lab @UVA
Project
2
T1D
RFA
2
T1D
organ_slims!
lung
annotation_type!
sQTL
software_used.software.name!
rasqual
Showing 2 of 2 results
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FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D