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Schema
Citing CMDGA
Clear Filters
Annotation type
1540
candidate regulatory elements
1279
target gene predictions
973
histone modifications
898
accessible chromatin
872
chromatin state
808
binding sites
682
gene expression
169
eQTL
167
differential activity
139
variant allelic effects
74
Fine-mapped variants
7
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
7
Genetic variant effects
Annotation type Category
4
snATAC-seq
3
ATAC-seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
GRCh38
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
tissue
Biosample term
2
CD4-positive helper T cell
1
coronary artery
1
endothelial cell
1
fibroblast of the aortic adventitia
1
macrophage
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
heart
1
connective tissue
1
epithelium
Date released
5
February, 2023
2
October, 2022
Software used
11
rasqual
eigenmt
2
matrix-eQTL
Lab
5
AMP-T2D consortium
2
Stephen S. Rich Lab @UVA
Project
5
AMP
2
T1D
RFA
5
AMP
2
T1D
organ_slims!
lung
software_used.software.name!
eigenmt
Showing 7 of 7 results
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Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D