Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
10
accessible chromatin
7
gene expression
4
candidate regulatory elements
3
chromatin state
2
histone modifications
2
target gene predictions
1
binding sites
1
eQTL
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
27
common myeloid progenitor, CD34-positive
19
hematopoietic multipotent progenitor cell
14
B cell
14
CD4-positive, alpha-beta memory T cell
13
spleen
13
stomach
12
adrenal gland
11
foreskin keratinocyte
10
liver
10
sigmoid colon
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
body of pancreas
8
gastrocnemius medialis
8
thyroid gland
8
transverse colon
7
CD8-positive, alpha-beta T cell
7
Peyer's patch
7
adipose tissue
7
endocrine pancreas
7
heart left ventricle
7
mononuclear cell
7
psoas muscle
6
T-helper 1 cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
foreskin fibroblast
6
layer of hippocampus
6
lower leg skin
6
natural killer cell
6
ovary
6
skeletal muscle tissue
6
small intestine
6
tibial nerve
5
T-helper 17 cell
5
T-helper 2 cell
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
omental fat pad
5
pancreas
5
parathyroid adenoma
5
regulatory T cell
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
T cell
4
T-cell
4
adipocyte
4
angular gyrus
4
aorta
4
ascending aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
epithelial cell of prostate
4
esophagus
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
heart right ventricle
4
kidney
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle myoblast
4
stomach smooth muscle
4
testis
4
thoracic aorta
4
vagina
3
cerebellum
3
coronary artery
3
heart
3
keratinocyte
3
kidney tubule cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
naive T cell
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
uterus
2
Ammon's horn
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
bipolar neuron
2
brain microvascular endothelial cell
2
cardiac fibroblast
2
cardiac muscle cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast of cardiac tissue
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
frontal cortex
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
mesenchymal stem cell
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
muscle cell
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
pulmonary artery endothelial cell
2
putamen
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
right cardiac atrium
2
right lobe of liver
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
2
subcutaneous adipose tissue
2
thymus
2
urinary bladder
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
amniotic epithelial cell
1
brain pericyte
1
chorion membrane
1
effector memory CD4-positive, alpha-beta T cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
germinal center
1
hepatic stellate cell
1
hepatocyte
1
inferior parietal cortex
1
luminal epithelial cell of mammary gland
1
mammary stem cell
1
medulla oblongata
1
midbrain
1
myocyte
1
myotube
1
occipital lobe
1
olfactory neurosphere cell line
1
pericyte cell
1
pons
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
regular cardiac myocyte
1
superior temporal gyrus
Organ
4
kidney
Life stage
embryonic
4
adult
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
lung
biosample_type!
cell line
relevant_life_stage!
embryonic
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR636DQS
released
Annotation file set
: Candidate regulatory elements for BSS01097 kidney from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR103NJL
released
Annotation file set
: Candidate regulatory elements for BSS01096 kidney from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR778MFT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR023URV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney
Lab:
AMP-T2D consortium
Project:
AMP