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Schema
Citing CMDGA
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Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
18
fibroblast
18
pericyte cell
16
endothelial cell
12
excitatory neuron
12
smooth muscle cell
10
macrophage
9
astrocyte
6
colon epithelial cell
5
adipocyte
5
cortical cell of adrenal gland
5
erythroblast
5
inhibitory neuron
5
keratinocyte
4
T cell
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
gabaergic neuron
4
glutamatergic neuron
4
luminal epithelial cell of mammary gland
4
pancreatic acinar cell
4
skeletal muscle satellite cell
4
smooth muscle cell of the esophagus
3
B cell
3
endocardial cell
3
endothelial cell of lymphatic vessel
3
enteric neuron
3
enterocyte
3
fibroblast of cardiac tissue
3
islet of Langerhans
3
mesothelial cell
3
oligodendrocyte precursor cell
3
pancreatic ductal cell
3
schwann cell
3
skeletal muscle fiber
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
ESC derived cell line
2
Muller cell
2
alveolar macrophage
2
basal cell
2
basal cell of epidermis
2
cardiac endothelial cell
2
ciliated cell
2
club cell
2
colon goblet cell
2
eccrine cell
2
endothelial cell of hepatic sinusoid
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
fetal cardiomyocyte
2
foveolar cell of stomach
2
granular cell of epidermis
2
hepatocyte
2
intestinal tuft cell
2
liver
2
luteal cell
2
mammary gland epithelial cell
2
mast cell
2
mature NK T cell
2
melanocyte
2
memory B cell
2
mesangial cell
2
microglial cell
2
myoepithelial cell
2
naive t cell
2
non keratinizing barrier epithelial cell
2
oligodendrocyte
2
pancreatic A cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
paneth cell
2
parietal cell
2
peptic cell
2
plasma cell
2
regular atrial cardiac myocyte
2
respiratory goblet cell
2
skeletal muscle fibroblast
2
skin fibroblast
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
stromal cell
2
thyroid follicular cell
2
type B pancreatic cell
2
type I cell of adrenal cortex
2
type I muscle cell
2
type II cell of adrenal cortex
2
type II muscle cell
2
uterine smooth muscle cell
2
ventricular cardiac muscle cell
1
CD34-PB
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
caudate nucleus
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
enteroendocrine cell
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
gastric goblet cell
1
glial cell
1
goblet cell
1
hepatic stellate cell
1
hepatoblast
1
layer of hippocampus
1
mammary epithelial cell
1
megakaryocyte
1
metanephros
1
mid-frontal lobe
1
mucosa of rectum
1
neuron
1
pancreas
1
parietal epithelial cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
rectum smooth muscle tissue
1
retinal bipolar neuron
1
retinal pigment epithelial cell
1
skeletal muscle
1
skeletal muscle myoblast
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
sympathetic neuron
1
temporal lobe
1
trophoblast giant cell
1
ureteric bud
Organ
1
brain
Date released
6
September, 2022
2
February, 2021
1
August, 2017
0
November, 2021
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
organ_slims!
lung
Showing 1 of 1 results
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Download
FileSet
TSTSR903521
released
Annotation file set
: ChromHMM 13-state model for cingulate gyrus
Lab:
Stephen Parker, UMich
Project:
AMP