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Schema
Citing CMDGA
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Annotation type
6
accessible chromatin
6
chromatin state
6
target gene predictions
4
candidate regulatory elements
2
gene expression
1
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
2
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
1
snRNA-seq
Available data
1
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Biosample term
5
mesangial cell
5
osteoblast
5
subcutaneous adipose tissue
4
adipose tissue
4
bone tissue
4
foreskin fibroblast
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Fibroblast
3
Mesangial Cell
3
adipocyte
3
adult endothelial progenitor cell
2
cardiac fibroblast
2
fibroblast
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
hepatic stellate cell
2
mesenchymal stem cell
2
omental fat pad
2
pancreatic stellate cell
2
visceral abdominal adipose tissue
1
GM23248
1
activated pancreatic stellate cell
1
adipose tissue derived mesenchymal stem cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
chondrocyte
1
columnar chondrocyte
1
fibroblast of cardiac tissue
1
fibroblast of dermis
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
preadipocyte
1
pulmonary interstitial fibroblast
1
quiescent pancreatic stellate cell
1
skin fibroblast
Organ
3
connective tissue
Life stage
1
adult
Date released
2
February, 2021
1
February, 2024
Software used
2
r
1
deeptools
1
macs
1
samtools
1
umitools
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
organ_slims!
lymph node
Showing 3 of 3 results
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FileSet
DSR356IFR
released
Annotation file set
: Gene expression annotation of adipocyte from abdominal and gluteo-femoral preadipocytes of GSE118500 for GSE118497
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR389QIM
released
Annotation file set
: Binding sites annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP