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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
accessible chromatin
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
53
H1-hESC
14
trophoblast cell
9
H9
8
chorionic villus
7
trophoblast
6
HUES8
6
endodermal cell
5
CyT49
5
H7-hESC
4
HUES6
4
mesodermal cell
3
H4
3
HUES64
3
ectodermal cell
3
embryonic facial prominence
3
hESC H9
3
primordial germ cell
2
ELF-1
2
ES-I3
2
HUES48
2
UCSF-4
2
cardiac mesoderm primordium
2
first pancreatic bud
1
cardiogenic mesoderm
1
embryonic fibroblast
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
trophoblast giant cell
Organ
5
embryo
Life stage
2
embryonic
Date released
2
September, 2022
1
February, 2021
1
June, 2020
1
May, 2021
Software used
2
macs
1
abc
1
chromhmm
1
r
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
organ_slims!
lymph node
annotation_type!
candidate regulatory elements
Showing 5 of 5 results
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Download
FileSet
DSR472ULW
released
Annotation file set
: Target gene predictions for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR803QHX
released
Annotation file set
: Chromatin states for BSS00483 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157MZQ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486DHW
released
Annotation file set
: enhancer-gene predicton of H7 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR227UQF
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP