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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
candidate regulatory elements
1
chromatin state
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
51
H1-hESC
21
trophoblast cell
16
H9
16
chorionic villus
9
trophoblast
8
endodermal cell
6
mesodermal cell
4
CyT49
4
ELF-1
4
H4
4
H7-hESC
4
HUES48
4
HUES6
4
HUES64
4
HUES8
4
UCSF-4
4
ectodermal cell
3
ES-I3
3
cardiac mesoderm primordium
3
embryonic facial prominence
1
H1
1
H7
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
Organ
4
embryo
Life stage
3
embryonic
Date released
3
September, 2022
1
May, 2021
Software used
macs
2
r
1
abc
1
chromhmm
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
organ_slims!
lymph node
software_used.software.name!
macs
Showing 4 of 4 results
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Download
FileSet
DSR245YQC
released
Annotation file set
: Candidate regulatory elements for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR472ULW
released
Annotation file set
: Target gene predictions for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR803QHX
released
Annotation file set
: Chromatin states for BSS00483 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486DHW
released
Annotation file set
: enhancer-gene predicton of H7 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP