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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
Biosample term
53
H1-hESC
14
trophoblast cell
9
H9
8
chorionic villus
7
trophoblast
6
HUES8
6
endodermal cell
5
CyT49
5
H7-hESC
4
HUES6
4
mesodermal cell
3
H4
3
HUES64
3
ectodermal cell
3
embryonic facial prominence
3
hESC H9
3
primordial germ cell
2
ELF-1
2
ES-I3
2
HUES48
2
UCSF-4
2
cardiac mesoderm primordium
2
first pancreatic bud
1
cardiogenic mesoderm
1
embryonic fibroblast
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
trophoblast giant cell
Organ
3
embryo
Life stage
2
embryonic
Date released
2
September, 2022
1
February, 2021
Software used
1
chromhmm
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
lymph node
annotation_type!
candidate regulatory elements
Showing 3 of 3 results
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Download
FileSet
DSR203UHP
released
Annotation file set
: Target gene predictions for BSS00273 ectodermal cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR957XUP
released
Annotation file set
: Chromatin states for BSS00273 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR729IJS
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_ectodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP