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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
4
chromatin state
4
target gene predictions
2
binding sites
Annotation Category
4
Target gene links
4
cis-regulatory elements
Annotation type Category
7
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
3
bed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
3
GRCh38
Organism
8
Homo sapiens
Biosample type
8
primary cell
Biosample term
37
A549
33
lung
26
left lung
22
right lung
8
fibroblast of lung
6
upper lobe of left lung
3
IMR-90
3
PC-9
2
NCI-H226 cell
2
NCI-H460 cell
2
WI38
2
lung microvascular endothelial cell
2
type II pneumocyte
1
type I pneumocyte
Organ
8
connective tissue
8
lung
Life stage
4
unknown
2
adult
Date released
6
September, 2022
1
August, 2017
1
May, 2021
Software used
4
chromhmm
3
r
1
abc
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
1
Stephen Parker, UMich
Project
8
AMP
RFA
8
AMP
organ_slims!
lymph node
Showing 8 of 8 results
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FileSet
DSR340GAW
released
Annotation file set
: Target gene predictions for BSS00342 fibroblast of lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR498HKW
released
Annotation file set
: Target gene predictions for BSS00341 fibroblast of lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR226WKJ
released
Annotation file set
: Target gene predictions for BSS00339 fibroblast of lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR805FGA
released
Annotation file set
: Chromatin states for BSS00342 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR223DHC
released
Annotation file set
: Chromatin states for BSS00341 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR910XOT
released
Annotation file set
: Chromatin states for BSS00339 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR319ZJZ
released
Annotation file set
: enhancer-gene predicton of fibroblast_of_lung-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
TSTSR646989
released
Annotation file set
: ChromHMM 13-state model for fibroblast of lung
Lab:
Stephen Parker, UMich
Project:
AMP