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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
8
epithelial cell of prostate
8
prostate gland
6
22Rv1
6
LNCaP clone FGC
4
PC-3
4
RWPE1
3
C4-2B
3
RWPE2
3
VCaP cell
2
LNCAP
1
luminal epithelial cell of prostatic duct
1
prostate
Organ
2
prostate gland
Date released
February, 2021
1
June, 2020
1
May, 2021
Software used
1
abc
1
macs
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
organ_slims!
lymphatic vessel
month_released!
February, 2021
Showing 2 of 2 results
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Download
FileSet
DSR563FIF
released
Annotation file set
: enhancer-gene predicton of LNCAP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR475PYM
released
Annotation file set
: Accessible chromatin annotation for Prostate LNCAP from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP