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Citing CMDGA
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Annotation type
4
target gene predictions
Annotation Category
4
Target gene links
Annotation type Category
5228
ChIP-seq
3046
DNase-seq
548
RNA-seq
504
ATAC-seq
410
snATAC-seq
305
single cell RNA-seq
188
HiC
147
scRNA-seq
139
H3K27ac ChIP-Seq
84
snDropSeq
47
pCHi-C
17
Expression arrays
12
snRNA-seq
4
Capture-C
4
RNA microarray
3
DNA methylation profiling by array assay
3
quantitative proteomics
1
SNP-SELEX
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
stem cell
Biosample term
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
Human Mesenchymal Cell derived Osteoblasts
1
undifferentiated ESC (H9 cell line)
Organ
3
brain
1
connective tissue
Date released
4
September, 2023
Software used
4
chicago
Lab
4
Struan F.A. Grant, CHOP
Project
4
AMP
RFA
4
AMP2
organ_slims!
lymphoid tissue
biosample_term_name!
Human Mesenchymal Cell derived Osteoblasts
Showing 4 of 4 results
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FileSet
DSR383OMT
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Progenitor (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR416XCR
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Neuron (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR722BWL
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of Human Mesenchymal Cell derived Adipocytes (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP