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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ATAC-seq
1
pCHi-C
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
1
Homo sapiens
Biosample type
3
primary cell
Biosample term
6
tibial nerve
4
heart
4
right atrium auricular region
4
tibial artery
3
B cell
3
CD8-positive, alpha-beta T cell
3
body of pancreas
3
cerebellum
3
coronary artery
3
frontal cortex
3
heart left ventricle
3
islet of Langerhans
3
monocyte
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
retina
3
skeletal muscle myoblast
3
subcutaneous adipose tissue
2
cardiac fibroblast
2
muscle of leg
2
CD4-positive, alpha-beta T cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
ascending aorta
2
brain
2
caudate nucleus
2
central memory CD8-positive, alpha-beta T cell
2
cerebellum (Hemisphere)
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
gamma-delta T cell
2
gastrocnemius medialis(Muscle - Skeletal)
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
left renal cortex interstitium
2
left ventricle myocardium
2
mature natural killer cell
2
medulla oblongata
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
midbrain
2
naive regulatory T cell
2
occipital lobe
2
omental fat pad
2
putamen
2
regulatory T cell
2
renal cortical epithelial cell
2
right kidney
2
right renal cortex interstitium
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
EndoC_BH1
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Pancreatic islets
1
Preadipose SGBS cell line (adipocyte)
1
activated CD4-positive, alpha-beta T cell
1
adipose tissue
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
choroid plexus epithelial cell
1
diencephalon
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell of coronary artery
1
erythroblast
1
globus pallidus
1
heart right ventricle
1
hepatic stellate cell
1
hepatocyte
1
hypothalamus
1
immature natural killer cell
1
inflammatory macrophage
1
kidney
1
kidney capillary endothelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left renal pelvis
1
liver
1
lymphocyte of B lineage (iPSC)
1
macrophage
1
megakaryocyte
1
mesangial cell
1
mesenchymal stem cell of adipose
1
metanephros
1
middle frontal gyrus
1
muscle of arm
1
myeloid dendritic cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
nucleus accumbens
1
pancreas
1
parietal lobe
1
pericardium fibroblast
1
plasma cell
1
plasmacytoid dendritic cell
1
pons
1
renal cortex interstitium
1
renal glomerulus
1
renal pelvis
1
right lobe of liver
1
right renal pelvis
1
skeletal muscle cell
1
skeletal muscle satellite cell
1
skeletal muscle tissue
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
substantia nigra
1
superior temporal gyrus
1
temporal lobe
1
thoracic aorta
1
thymus
Date released
24
September, 2022
7
February, 2021
3
May, 2020
3
May, 2021
3
November, 2021
2
June, 2020
1
April, 2020
1
February, 2024
0
February, 2020
Software used
1
chicago
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
mouth
Showing 3 of 3 results
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Download
FileSet
DSR608ZFL
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR086SNH
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR709UFN
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated B cell
Lab:
AMP-T2D consortium
Project:
AMP