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Schema
Citing CMDGA
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Annotation type
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
9
pigmented layer of retina
7
retina
6
retinal pigment epithelial cell
5
chondrocyte
4
glutamatergic neuron
3
SGBS preadipocytes
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
monocyte
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
regulatory T cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
adipose tissue
1
embryonic stem cell
1
endothelial cell of umbilical vein
1
gabaergic neuron
1
immature natural killer cell
1
left renal cortex interstitium
1
medulla oblongata
1
microglial cell/astrocyte
1
midbrain
1
myeloid dendritic cell
1
natural killer cell
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
non-neuronal cell
1
oligodendrocyte
1
plasma cell
1
plasmacytoid dendritic cell
1
right kidney
1
right renal cortex interstitium
1
skeletal muscle myoblast
Date released
3
November, 2022
2
January, 2020
1
June, 2020
0
May, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
mouth
Showing 3 of 3 results
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Download
FileSet
DSR147XOZ
released
Annotation file set
: Accessible chromatin of ATAC-seq in a human cell model of immature adipocyte day 4
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR878UKL
released
Annotation file set
: Accessible chromatin of ATAC-seq in a human cell model of immature adipocyte day 2
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR016QWO
released
Annotation file set
: Accessible chromatin of ATAC-seq in a human cell model of preadipocytes day 0
Lab:
AMP-T2D consortium
Project:
AMP