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Citing CMDGA
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Annotation type
884
histone modifications
829
target gene predictions
775
binding sites
723
candidate regulatory elements
697
accessible chromatin
567
gene expression
427
chromatin state
162
differential activity
89
variant allelic effects
52
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
3
RNA-seq
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
tissue
Biosample term
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Life stage
3
adult
Date released
3
May, 2021
Software used
3
limix
3
sqtlseeker
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
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musculature of body
biosample_type!
tissue
Showing 3 of 3 results
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FileSet
DSR631VBI
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661WZX
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP