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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
10
chromatin state
10
target gene predictions
1
accessible chromatin
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
105
monocyte
35
CD8-positive, alpha-beta T cell
30
neural progenitor cell
25
retina
20
breast cancer cell
20
fibroblast
20
pigmented layer of retina
19
endothelial cell
15
macrophage
13
excitatory neuron
13
hepatocyte
12
endothelial cell of hepatic sinusoid
12
kidney
12
neuroblastoma cell
12
retinal pigment epithelial cell
11
embryonic stem cell
11
gastric cancer cell
10
B cell
10
EndoC_BH1
10
HepG2
10
Rhabdomyosarcoma
10
diffuse intrinsic pontine glioma
10
pancreatic ductal cell
10
pericyte cell
9
astrocyte
9
islet of Langerhans
9
keratinocyte
9
liposarcoma
8
T cell
8
T-cell acute lymphoblastic leukemia
8
adipocyte
8
esophageal adenocarcinoma
8
fibroblast cell line
8
osteoblast
8
pancreatic beta cell
8
smooth muscle cell
7
B-lymphoblastoid cell line
7
acute myeloid leukemia
7
cardiac muscle cell
7
chondrocyte
7
erythroblast
7
fibroblast of cardiac tissue
7
foreskin fibroblast
7
hESC cell
7
heart
7
liver
7
pancreatic acinar cell
6
Chondroid Chordoma
6
MCF-7
6
Rh-4 cell
6
SGBS preadipocytes
6
brain
6
hepatic stellate cell
6
neuroblastoma cell line
6
neuronal stem cell
6
pancreas
5
Ewing sarcoma
5
Jurkat
5
RS4-11 cell
5
Th1 cell
5
bronchial epithelial cell
5
choroid plexus epithelial cell
5
dermal fibroblast
5
diffuse large B-cell lymphoma
5
esophageal squamous cell carcinoma
5
glioblastoma multiforme cancer stem cell
5
glutamatergic neuron
5
lymphoblastoid cell line
5
mammary epithelial cell
5
osteosarcoma
5
prostate cancer cell line
5
regulatory T cell
4
A549
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
BE(2)-C
4
BJ cell
4
COLO205
4
Caco-2 cell
4
GM06990
4
GM12864
4
GM12865
4
GM12878
4
GM19240
4
H1-hESC
4
HAC cell
4
HBMEC cell
4
HCT-116 cell
4
HEK293
4
HL-60
4
HS-SY-2 cell
4
IMR-90
4
K562
4
Mantle cell lymphoma
4
NHEK
4
NT2-D1 cell
4
Normal Human Astrocytes
4
PANC-1 cell
4
SAEC
4
SK-N-MC
4
SK-N-SH_RA
4
T-47D cell
4
Tumor-derived cell line
4
U-87 MG
4
U2OS
4
WERI-Rb-1
4
WI-38 cell
4
acute myeloid leukemia cell
4
adipose-derived stem cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
colon adenocarcinoma
4
endothelial cell of umbilical vein
4
erythroid cell
4
erythroid progenitor cell
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
glioblastoma cell
4
glioma cell
4
immortal neural cell line cell
4
inhibitory neuron
4
natural killer cell
4
pancreatic alpha cell
4
pancreatic delta cell
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
3
cardiac fibroblast
3
786-O cell
3
A-673 cell
3
CD1c-positive myeloid dendritic cell
3
CD4-positive helper T cell
3
CMK
3
COLO-320 cell
3
D341 Med cell
3
DND-41 cell
3
ECC-1
3
G-401 cell
3
GM10847
3
GM12872
3
GM12873
3
GM12875
3
GM12891
3
GM12892
3
GM18505
3
GM18526
3
GM18951
3
GM19099
3
GM19193
3
GM19238
3
GM19239
3
GM23248
3
HAP-1
3
HEK293-T-REx cell
3
HT-29
3
HeLa cell
3
HuH-7
3
Ishikawa
3
KARPAS-422 cell
3
Kasumi-1
3
LHCN-M2
3
LNCAP
3
LoVo cell
3
MCF10A-Er-Src cell
3
MDA-MB-231 cell
3
MG63
3
MM.1S
3
MOLM-13 cell
3
Myoblasts
3
NAMALWA cell
3
NB-4 cell
3
NCCIT cell
3
NHBE cell
3
NHDF cell
3
OCI-AML3
3
OCI-LY7
3
PA-TU-8988T cell
3
PC-3
3
PC-9
3
REH cell
3
RKO
3
RPMI8226
3
RWPE1
3
Raji cell
3
SH-SY5Y cell
3
SW480
3
Saos-2 cell
3
T-helper 1 cell
3
Th17 cell
3
U-266 cell
3
U937
3
ZR-75-1 cell
3
adipose tissue
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
nose
Showing 3 of 3 results
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Download
FileSet
DSR383WGV
released
Annotation file set
: Histone modifications annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR818RAD
released
Annotation file set
: Binding sites annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP