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Schema
Citing CMDGA
Clear Filters
Annotation type
33
candidate regulatory elements
17
target gene predictions
16
chromatin state
4
accessible chromatin
1
caQTL
1
eQTL
1
gene expression
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
snATAC-seq
1
DNase-seq
Available data
4
bed bed3+
3
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
5
skeletal muscle fiber
5
skeletal muscle satellite cell
3
type I muscle cell
3
type II muscle cell
2
muscle of leg
1
hindlimb muscle
1
LHCN-M2
1
SJCRH30
1
esophagus muscularis mucosa
1
forelimb muscle
1
gastrocnemius medialis
1
muscle of arm
1
psoas muscle
1
skeletal muscle cell
Organ
4
musculature of body
1
limb
Life stage
1
fetal
1
unknown
Date released
1
February, 2024
1
January, 2020
1
May, 2022
1
November, 2021
Software used
4
macs
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
1
Stephen Parker, UMich
Project
3
AMP
1
ENCODE
RFA
2
AMP
1
AMP2
1
ENCODE3
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Showing 4 of 4 results
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Download
FileSet
DSR331TEA
released
Annotation file set
: Accessible chromatin from snATAC-seq of type II muscle cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR940UYQ
released
Annotation file set
: Accessible chromatin annotation of Type II Skeletal Myocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR816KKF
released
Annotation file set
: Cell type chromatin broad peaks and bw of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR112DEW
released
Annotation file set
: Accessible chromatin annotation of skeletal muscle arm from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP