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Citing CMDGA
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Annotation type
4
target gene predictions
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
Annotation Category
4
Target gene links
Annotation type Category
3
ATAC-seq
2
DNase-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
5
body of pancreas
5
pancreas
4
endocrine pancreas
4
pancreatic delta cell
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
type B pancreatic cell
2
Panc1
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
islet of Langerhans
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
Disease term
1
pancreatic adenocarcinoma
Organ
4
pancreas
3
epithelium
Life stage
1
adult
Date released
2
November, 2021
1
May, 2021
1
September, 2022
Software used
3
abc
1
r
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
organ_slims!
pericardium
Showing 4 of 4 results
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Download
FileSet
DSR947SRN
released
Annotation file set
: Target gene predictions for BSS00003 8988T from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855IQO
released
Annotation file set
: Target gene predictions of Pancreatic Beta Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR451TRZ
released
Annotation file set
: Target gene predictions of Pancreatic Beta Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR633DNL
released
Annotation file set
: enhancer-gene predicton of pancreatic-beta-cell-AMP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP